Showing: shortreadreset
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Trimming with ShortRead
shortread written 4.3 years ago by cookie20 • updated 4.3 years ago by Martin Morgan ♦♦ 23k
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398
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Vignette for ShortRead
shortread written 11.0 years ago by joseph330 • updated 11.0 years ago by Martin Morgan ♦♦ 23k
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2
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657
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2
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Solexa fastq files and BLAT
cancer biostrings shortread written 10.5 years ago by Daniel Brewer1.9k • updated 6 months ago by Bioconductor Community ♦♦ 0
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553
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496
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861
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read coverage per transcript for RNASeq
rnaseq coverage process shortread written 9.9 years ago by Jessica Hunter40 • updated 9.9 years ago by Martin Morgan ♦♦ 23k
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2
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575
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pileup function in ShortRead package
alignment shortread written 9.8 years ago by Nora Rieber40 • updated 9.8 years ago by Martin Morgan ♦♦ 23k
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491
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possible bug in extendReads() in package chipseq
alignment shortread written 9.7 years ago by Nora Rieber40 • updated 9.7 years ago by Martin Morgan ♦♦ 23k
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1
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491
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1
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ShortRead internal: too many 'snap' entries
shortread written 9.5 years ago by Ramzi TEMANNI160 • updated 9.5 years ago by Martin Morgan ♦♦ 23k
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1
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526
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Shortread and filtering of duplicate reads
shortread written 9.5 years ago by Johannes Waage50 • updated 9.5 years ago by Martin Morgan ♦♦ 23k
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1
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498
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1
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ShortRead with BAM
shortread written 9.2 years ago by Duke210 • updated 9.2 years ago by James W. MacDonald50k
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1
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383
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1
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Typo in ?FastqQuality help page?
shortread written 9.2 years ago by Peng Yu940 • updated 9.2 years ago by Martin Morgan ♦♦ 23k
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1
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621
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1
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ShortRead information
shortread written 9.1 years ago by Jennifer Dupiot10 • updated 9.1 years ago by Martin Morgan ♦♦ 23k
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1.1k
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Error installing Rsamtools
shortread rsamtools written 9.1 years ago by Paul Geeleher1.3k • updated 9.1 years ago by Martin Morgan ♦♦ 23k
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2
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686
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ShortRead QA
sequencing shortread written 9.0 years ago by Alex Gutteridge650 • updated 9.0 years ago by Martin Morgan ♦♦ 23k
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1
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567
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1
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fastq upload time
shortread written 8.8 years ago by Daniel.Berner@unibas.ch90 • updated 8.8 years ago by Sean Davis21k
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2
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633
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2
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0
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1
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602
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1
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ShortRead qa() for BAM files?
coverage alignment shortread written 8.8 years ago by wrighth260 • updated 8.8 years ago by Martin Morgan ♦♦ 23k
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1
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606
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1
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ShortRead for sequencing data quality assessment
sequencing shortread written 8.8 years ago by heyi xiao360 • updated 8.8 years ago by Valerie Obenchain6.7k
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740
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622
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mismatch & replacement
shortread written 8.7 years ago by Daniel.Berner@unibas.ch90 • updated 8.7 years ago by Harris A. Jaffee590
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590
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1
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A question about ShortRead_1.8.2.tar.gz.
shortread written 8.5 years ago by xujiabao10 • updated 8.5 years ago by Dan Tenenbaum8.2k
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1
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651
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1
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A question about ShortRead_1.8.2.tar.gz.
shortread written 8.5 years ago by Dan Tenenbaum8.2k • updated 8.5 years ago by Martin Morgan ♦♦ 23k
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1
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613
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1
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Error loading ShortRead
shortread written 8.2 years ago by raffaele calogero500 • updated 8.2 years ago by Martin Morgan ♦♦ 23k
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