Showing: shortreadreset
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Solexa fastq files and BLAT
cancer biostrings shortread written 10.5 years ago by Daniel Brewer1.9k • updated 6 months ago by Bioconductor Community ♦♦ 0
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error: incorrect number of fields (1) input.bam:1
shortread readaligned written 7 months ago by kspata10 • updated 7 months ago by Martin Morgan ♦♦ 23k
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Remove reads from raw fastq
biostrings shortread written 8 months ago by ferbecneu0 • updated 8 months ago by Gordon Smyth37k
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Should I use legacy functions in ShortRead package?
shortread written 16 months ago by Frocha10 • updated 16 months ago by Martin Morgan ♦♦ 23k
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4
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No BAM option in readAligned from the ShortRead package
shortread nucler bioconductor bam file written 17 months ago by jfgout10 • updated 17 months ago by Dario Strbenac1.5k
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bplapply with ShortRead functions
shortread biocparallel written 17 months ago by Vivek.b100 • updated 17 months ago by Martin Morgan ♦♦ 23k
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5
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strsplit method for DNAStringSet objects
biostrings shortread written 2.3 years ago by jma199130 • updated 2.3 years ago by Hervé Pagès ♦♦ 14k
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How to check that the reads in two fastq files are in the same order
shortread fastq written 2.6 years ago by Frocha10 • updated 2.6 years ago by James W. MacDonald50k
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2
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530
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FastqStreamer and qualitytype
shortread written 2.9 years ago by David860
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545
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Shortread convert S4 vector qualityScore to vector
shortread written 2.9 years ago by Radek60 • updated 2.9 years ago by Martin Morgan ♦♦ 23k
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make: *** [ShortRead.so] Error 1
shortread written 3.1 years ago by mictadlo0 • updated 3.1 years ago by Martin Morgan ♦♦ 23k
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Error Raised When Trying To Use pileup()
biostrings shortread hilbertvis rsamtools written 3.1 years ago by travis.m.couture0 • updated 3.1 years ago by Martin Morgan ♦♦ 23k
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ShortRead quality assessment functions (qa and qa2) from ShortReadQ object
shortread written 3.3 years ago by phil.chapman140 • updated 3.3 years ago by Martin Morgan ♦♦ 23k
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Using ShortRead (or other) to trim from pattern match onwards
shortread written 3.3 years ago by chapmandu220 • updated 3.3 years ago by Martin Morgan ♦♦ 23k
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IRanges/ShortRead causing crash?
biostrings iranges shortread written 3.7 years ago by pavitrarc20 • updated 3.7 years ago by Martin Morgan ♦♦ 23k
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