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Job: Single Cell Cancer Genomics
cancer job genomics single cell written 4.5 years ago by crispin.miller • 0
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modeling zero-dominated RNA-seq with voom/limma and hurdle models (pscl)
limma voom single cell hurdle written 3.8 years ago by osa.zuta • 40
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News: C1omics: single-cell omics methods and applications, Manchester 24-25 Nov 2015
news workshop conference single cell written 3.7 years ago by Wolfgang Huber ♦ 13k
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Job: PhD Studentship: Genome-scale analysis of host-pathogen interactions
rnaseq job R bioinformatics single cell epigenomics written 3.6 years ago by Garry Myers • 0
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Pool Single-cells: Analysis
limma deseq2 voom single cell written 3.2 years ago by Radek • 60 • updated 3.2 years ago by Aaron Lun • 24k
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scran: question on minimum cluster size for computeSumFactors()
normalization clustering single cell scran written 3.1 years ago by aatsmith • 0
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Job: Bioinformatics position at the Department of Genetics, Stanford, California
job rna-seq chip-seq single cell next-generation sequencing written 3.1 years ago by Katja Hebestreit • 110
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SCDE for differential expression
differential expression single cell scde written 2.9 years ago by mnaymik • 10
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Disagreement between TMM (edgeR) and RLE (DESeq) normalisation for single-cell data
rnaseq normalization edger deseq2 single cell written 2.8 years ago by kieranrcampbell • 30 • updated 2.8 years ago by Aaron Lun • 24k
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Tutorial: Workflow for low-level analysis of single-cell RNA-seq data
single cell tutorial scran scater written 2.8 years ago by Aaron Lun • 24k
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News: Ascona Workshop 2017 - Statistical Challenges in Single-Cell Biology: Deadline on 20 January
news conference single cell statistical modeling written 2.7 years ago by Wolfgang Huber ♦ 13k
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SC3 with latent variable corrected counts
single cell sc3 written 2.6 years ago by Mark • 10 • updated 2.6 years ago by Vladimir Kiselev • 150
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sc3_prepare function error
single cell single-cell scater sc3 written 2.3 years ago by Assa Yeroslaviz • 1.4k • updated 2.3 years ago by Vladimir Kiselev • 150
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Single cells batch effects
single cell batch effect ruv written 2.2 years ago by riccardo • 70
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Batch effects and model matrices
deseq2 single cell monocle written 24 months ago by bvernot • 0 • updated 24 months ago by Michael Love ♦ 24k
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Cell type specific cell markers for Seurat based analysis.
clustering single cell seurat written 23 months ago by hrishi27n • 20 • updated 23 months ago by ankur.chakravarthy.10 • 40
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Does it make sense to consider RUVr normalization for single cell RNA analysis?
ruvseq single cell ruv ruvnormalize ruvr written 22 months ago by Nik Tuzov • 70
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Regarding scRNA seq vs Bulk RNA seq
rnaseq single cell written 21 months ago by naman.sep • 0 • updated 21 months ago by galib36 • 10
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SingleCellExperiment function in SingleCellExperiment package returns error (when reproducing example)
R bioconductor single cell singlecellexperiment written 20 months ago by Walter F. Baumann • 10 • updated 20 months ago by lahrmannu • 0
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SC3 gene clusters
single cell tutorial single-cell sc3 written 20 months ago by ahmed.elewa • 20 • updated 20 months ago by Martin Morgan ♦♦ 23k
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Job: Scientific Programmer - Cambridge, UK
job single cell c++ software engineer written 19 months ago by Aaron Lun • 24k
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Job: Post-doc / Research Engineer Position: single cell RNAseq R/Perl applications development, IPMC, Sophia Antipolis, France
job single cell written 17 months ago by Agnes Paquet • 10
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BASiCS spike info for single cell RNA sequences or Bayesian statistics help
bayesian single cell scrnaseq basics written 16 months ago by alexandriapinto1 • 10 • updated 16 months ago by CataVallejos • 10
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News: SCANGEN: Single-cell cancer genomics workshop at ISMB 2018
news statistics single cell cancer genomics written 14 months ago by kieranrcampbell • 30
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splatter simulating paths
single cell splatter written 14 months ago by nikolaspapadop • 10
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