1
vote
2
answers
740
views
2
answers
0
votes
1
answer
461
views
1
answer
can we use sva function to estimate artifacts for rna seq data?
sva batcheffectcorrection svaseq written 18 months ago by szenitha0 • updated 18 months ago by Jeff Leek500
2
votes
1
answer
474
views
1
answer
Regarding batch effect in Deseq2 package
sva deseq2 svaseq written 18 months ago by szenitha0 • updated 18 months ago by Michael Love16k
1
vote
2
answers
757
views
2
answers
3
votes
2
answers
430
views
2
answers
2
votes
1
answer
336
views
1
answer
3
votes
1
answer
532
views
1
answer
(batch) corrections of RNA-seq data: integrating LIMMA and SVA
limma sva svaseq written 11 months ago by Bogdan480 • updated 11 months ago by Aaron Lun18k
3
votes
1
answer
246
views
1
answer
Taking surrogate variable into account before running PCA
sva svaseq written 8 months ago by wamiqsaifi0 • updated 8 months ago by Guido Hooiveld2.2k
0
votes
1
answer
494
views
1
answer
RNASeq fold change analysis after subtraction of contaminating MEF signal
deseq2 svaseq written 6 months ago by gpalidwor0 • updated 6 months ago by Michael Love16k
0
votes
0
answers
400
views
0
answers
1
vote
1
answer
151
views
1
answer
Outputting batch-effect free normalized counts
edaseq ruvseq svaseq written 3 months ago by llo0 • updated 3 months ago by davide risso650
0
votes
0
answers
120
views
0
answers
1
vote
1
answer
104
views
1
answer
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