1
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2
answers
1.2k
views
2
answers
0
votes
1
answer
720
views
1
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can we use sva function to estimate artifacts for rna seq data?
sva batcheffectcorrection svaseq written 2.3 years ago by szenitha0 • updated 2.3 years ago by Jeff Leek520
2
votes
1
answer
681
views
1
answer
Regarding batch effect in Deseq2 package
sva deseq2 svaseq written 2.2 years ago by szenitha0 • updated 2.2 years ago by Michael Love20k
1
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2
answers
1.4k
views
2
answers
3
votes
2
answers
605
views
2
answers
2
votes
1
answer
501
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1
answer
3
votes
1
answer
913
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1
answer
(batch) corrections of RNA-seq data: integrating LIMMA and SVA
limma sva svaseq written 20 months ago by Bogdan520 • updated 20 months ago by Aaron Lun21k
3
votes
1
answer
448
views
1
answer
Taking surrogate variable into account before running PCA
sva svaseq written 17 months ago by wamiqsaifi0 • updated 17 months ago by Guido Hooiveld2.3k
0
votes
1
answer
614
views
1
answer
RNASeq fold change analysis after subtraction of contaminating MEF signal
deseq2 svaseq written 15 months ago by gpalidwor0 • updated 15 months ago by Michael Love20k
0
votes
0
answers
494
views
0
answers
1
vote
1
answer
334
views
1
answer
Outputting batch-effect free normalized counts
edaseq ruvseq svaseq written 12 months ago by llo0 • updated 12 months ago by davide risso780
0
votes
0
answers
252
views
0
answers
1
vote
1
answer
408
views
1
answer
3
votes
1
answer
194
views
1
answer
Calling svaseq() multiple times
limma edger sva svaseq written 5 months ago by cats_dogs0 • updated 5 months ago by Ryan C. Thompson7.0k
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