1
vote
2
answers
854
views
2
answers
0
votes
1
answer
555
views
1
answer
can we use sva function to estimate artifacts for rna seq data?
sva batcheffectcorrection svaseq written 21 months ago by szenitha0 • updated 21 months ago by Jeff Leek510
2
votes
1
answer
567
views
1
answer
Regarding batch effect in Deseq2 package
sva deseq2 svaseq written 21 months ago by szenitha0 • updated 21 months ago by Michael Love17k
1
vote
2
answers
1.0k
views
2
answers
3
votes
2
answers
490
views
2
answers
2
votes
1
answer
398
views
1
answer
3
votes
1
answer
666
views
1
answer
(batch) corrections of RNA-seq data: integrating LIMMA and SVA
limma sva svaseq written 14 months ago by Bogdan490 • updated 14 months ago by Aaron Lun19k
3
votes
1
answer
320
views
1
answer
Taking surrogate variable into account before running PCA
sva svaseq written 11 months ago by wamiqsaifi0 • updated 11 months ago by Guido Hooiveld2.3k
0
votes
1
answer
530
views
1
answer
RNASeq fold change analysis after subtraction of contaminating MEF signal
deseq2 svaseq written 9 months ago by gpalidwor0 • updated 9 months ago by Michael Love17k
0
votes
0
answers
423
views
0
answers
1
vote
1
answer
202
views
1
answer
Outputting batch-effect free normalized counts
edaseq ruvseq svaseq written 6 months ago by llo0 • updated 6 months ago by davide risso680
0
votes
0
answers
179
views
0
answers
1
vote
1
answer
192
views
1
answer
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