1
vote
1
answer
108
views
1
answer
0
votes
0
answers
122
views
0
answers
1
vote
1
answer
155
views
1
answer
Outputting batch-effect free normalized counts
edaseq ruvseq svaseq written 3 months ago by llo0 • updated 3 months ago by davide risso650
0
votes
0
answers
402
views
0
answers
0
votes
1
answer
494
views
1
answer
RNASeq fold change analysis after subtraction of contaminating MEF signal
deseq2 svaseq written 6 months ago by gpalidwor0 • updated 6 months ago by Michael Love16k
3
votes
1
answer
252
views
1
answer
Taking surrogate variable into account before running PCA
sva svaseq written 8 months ago by wamiqsaifi0 • updated 8 months ago by Guido Hooiveld2.2k
3
votes
1
answer
536
views
1
answer
(batch) corrections of RNA-seq data: integrating LIMMA and SVA
limma sva svaseq written 12 months ago by Bogdan480 • updated 12 months ago by Aaron Lun18k
2
votes
1
answer
341
views
1
answer
3
votes
2
answers
433
views
2
answers
1
vote
2
answers
767
views
2
answers
2
votes
1
answer
477
views
1
answer
Regarding batch effect in Deseq2 package
sva deseq2 svaseq written 18 months ago by szenitha0 • updated 18 months ago by Michael Love16k
0
votes
1
answer
462
views
1
answer
can we use sva function to estimate artifacts for rna seq data?
sva batcheffectcorrection svaseq written 18 months ago by szenitha0 • updated 18 months ago by Jeff Leek500
1
vote
2
answers
748
views
2
answers
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