3
votes
1
answer
105
views
1
answer
Calling svaseq() multiple times
limma edger sva svaseq written 7 weeks ago by cats_dogs0 • updated 7 weeks ago by Ryan C. Thompson6.8k
1
vote
1
answer
241
views
1
answer
0
votes
0
answers
200
views
0
answers
1
vote
1
answer
237
views
1
answer
Outputting batch-effect free normalized counts
edaseq ruvseq svaseq written 8 months ago by llo0 • updated 8 months ago by davide risso740
0
votes
0
answers
438
views
0
answers
0
votes
1
answer
550
views
1
answer
RNASeq fold change analysis after subtraction of contaminating MEF signal
deseq2 svaseq written 11 months ago by gpalidwor0 • updated 11 months ago by Michael Love18k
3
votes
1
answer
358
views
1
answer
Taking surrogate variable into account before running PCA
sva svaseq written 13 months ago by wamiqsaifi0 • updated 13 months ago by Guido Hooiveld2.3k
3
votes
1
answer
728
views
1
answer
(batch) corrections of RNA-seq data: integrating LIMMA and SVA
limma sva svaseq written 16 months ago by Bogdan490 • updated 16 months ago by Aaron Lun20k
2
votes
1
answer
441
views
1
answer
3
votes
2
answers
528
views
2
answers
1
vote
2
answers
1.1k
views
2
answers
2
votes
1
answer
594
views
1
answer
Regarding batch effect in Deseq2 package
sva deseq2 svaseq written 22 months ago by szenitha0 • updated 22 months ago by Michael Love18k
0
votes
1
answer
603
views
1
answer
can we use sva function to estimate artifacts for rna seq data?
sva batcheffectcorrection svaseq written 23 months ago by szenitha0 • updated 23 months ago by Jeff Leek520
1
vote
2
answers
925
views
2
answers
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