0
votes
0
answers
102
views
0
answers
1
vote
1
answer
135
views
1
answer
Outputting batch-effect free normalized counts
edaseq ruvseq svaseq written 10 weeks ago by llo0 • updated 10 weeks ago by davide risso630
0
votes
0
answers
392
views
0
answers
0
votes
1
answer
483
views
1
answer
RNASeq fold change analysis after subtraction of contaminating MEF signal
deseq2 svaseq written 5 months ago by gpalidwor0 • updated 5 months ago by Michael Love15k
3
votes
1
answer
229
views
1
answer
Taking surrogate variable into account before running PCA
sva svaseq written 7 months ago by wamiqsaifi0 • updated 7 months ago by Guido Hooiveld2.2k
3
votes
1
answer
496
views
1
answer
(batch) corrections of RNA-seq data: integrating LIMMA and SVA
limma sva svaseq written 10 months ago by Bogdan480 • updated 10 months ago by Aaron Lun18k
2
votes
1
answer
319
views
1
answer
3
votes
2
answers
418
views
2
answers
1
vote
2
answers
676
views
2
answers
2
votes
1
answer
447
views
1
answer
Regarding batch effect in Deseq2 package
sva deseq2 svaseq written 17 months ago by szenitha0 • updated 16 months ago by Michael Love15k
0
votes
1
answer
430
views
1
answer
can we use sva function to estimate artifacts for rna seq data?
sva batcheffectcorrection svaseq written 17 months ago by szenitha0 • updated 17 months ago by Jeff Leek490
1
vote
2
answers
710
views
2
answers
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