0
votes
0
answers
56
views
0
answers
1
vote
1
answer
88
views
1
answer
Outputting batch-effect free normalized counts
edaseq ruvseq svaseq written 11 days ago by llo0 • updated 10 days ago by davide risso490
0
votes
0
answers
373
views
0
answers
0
votes
1
answer
449
views
1
answer
RNASeq fold change analysis after subtraction of contaminating MEF signal
deseq2 svaseq written 3 months ago by gpalidwor0 • updated 3 months ago by Michael Love14k
3
votes
1
answer
199
views
1
answer
Taking surrogate variable into account before running PCA
sva svaseq written 5 months ago by wamiqsaifi0 • updated 5 months ago by Guido Hooiveld2.1k
3
votes
1
answer
430
views
1
answer
(batch) corrections of RNA-seq data: integrating LIMMA and SVA
limma sva svaseq written 8 months ago by Bogdan470 • updated 8 months ago by Aaron Lun17k
2
votes
1
answer
291
views
1
answer
3
votes
2
answers
375
views
2
answers
1
vote
2
answers
596
views
2
answers
2
votes
1
answer
402
views
1
answer
Regarding batch effect in Deseq2 package
sva deseq2 svaseq written 14 months ago by szenitha0 • updated 14 months ago by Michael Love14k
0
votes
1
answer
395
views
1
answer
can we use sva function to estimate artifacts for rna seq data?
sva batcheffectcorrection svaseq written 15 months ago by szenitha0 • updated 15 months ago by Jeff Leek490
0
votes
2
answers
666
views
2
answers
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