1
vote
2
answers
1.5k
views
2
answers
1
vote
2
answers
1.2k
views
2
answers
3
votes
1
answer
941
views
1
answer
(batch) corrections of RNA-seq data: integrating LIMMA and SVA
limma sva svaseq written 21 months ago by Bogdan530 • updated 21 months ago by Aaron Lun21k
0
votes
1
answer
735
views
1
answer
can we use sva function to estimate artifacts for rna seq data?
sva batcheffectcorrection svaseq written 2.3 years ago by szenitha0 • updated 2.3 years ago by Jeff Leek520
2
votes
1
answer
692
views
1
answer
Regarding batch effect in Deseq2 package
sva deseq2 svaseq written 2.3 years ago by szenitha0 • updated 2.3 years ago by Michael Love20k
0
votes
1
answer
624
views
1
answer
RNASeq fold change analysis after subtraction of contaminating MEF signal
deseq2 svaseq written 16 months ago by gpalidwor0 • updated 16 months ago by Michael Love20k
3
votes
2
answers
617
views
2
answers
2
votes
1
answer
520
views
1
answer
0
votes
0
answers
504
views
0
answers
3
votes
1
answer
470
views
1
answer
Taking surrogate variable into account before running PCA
sva svaseq written 18 months ago by wamiqsaifi0 • updated 18 months ago by Guido Hooiveld2.3k
1
vote
1
answer
445
views
1
answer
1
vote
1
answer
352
views
1
answer
Outputting batch-effect free normalized counts
edaseq ruvseq svaseq written 13 months ago by llo0 • updated 13 months ago by davide risso780
0
votes
0
answers
259
views
0
answers
3
votes
1
answer
207
views
1
answer
Calling svaseq() multiple times
limma edger sva svaseq written 6 months ago by cats_dogs0 • updated 6 months ago by Ryan C. Thompson7.0k
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