17
votes
1
answer
254
views
6 follow
1
answer
How to check the read length for all the TCGA data samples in GDC?
tcga wes gdc gdc data written 9 weeks ago by Biologist70 • updated 9 weeks ago by Sean Davis21k
13
votes
6
answers
6.8k
views
8 follow
6
answers
7
votes
3
answers
2.3k
views
3
answers
5
votes
2
answers
2.4k
views
2
answers
0
votes
0
answers
1.4k
views
0
answers
1
vote
1
answer
3.3k
views
1
answer
Differential Analysis for gene expression from TCGA (Level 3)
microarray limma tcga written 3.2 years ago by hudacdif0 • updated 3.2 years ago by Steve Lianoglou12k
0
votes
2
answers
1.7k
views
2
answers
0
votes
0
answers
1.9k
views
0
answers
1
vote
3
answers
1.9k
views
3
answers
0
votes
0
answers
406
views
0
answers
RNAseq binary transformation
rnaseq tcga binary written 3.1 years ago by ezz0
0
votes
1
answer
707
views
1
answer
Mapping of two different regions to one gene symbol
tcga cnv written 3.1 years ago by NS10 • updated 3.1 years ago by Marc Carlson7.2k
4
votes
1
answer
1.5k
views
1
answer
DESeq2 - design for TCGA level 3 data
deseq2 tcga multiple factor design experimental design written 3.1 years ago by anand m t40 • updated 3.1 years ago by Michael Love18k
1
vote
2
answers
1.2k
views
2
answers
R Text progress bar error
tcga written 2.5 years ago by devyani660
0
votes
1
answer
619
views
1
answer
mutational signatures problems
annotation bsgenome somaticsignatures readvcf tcga written 2.3 years ago by jolligoodfellow0 • updated 2.3 years ago by Julian Gehring1.3k
0
votes
0
answers
396
views
0
answers
0
votes
1
answer
390
views
1
answer
TCGAvisualize_EAbarplot Function Issue
tcga written 2.3 years ago by pgreylin0 • updated 8 months ago by eshelden20
0
votes
1
answer
545
views
1
answer
Differential gene expression analysis for GSE62944
cancer limma R bioconductor tcga written 2.2 years ago by hamda.binte.ajmal0 • updated 2.2 years ago by Valerie Obenchain ♦♦ 6.5k
0
votes
1
answer
478
views
1
answer
2
votes
1
answer
505
views
1
answer
0
votes
0
answers
640
views
0
answers
TCGABiolinks not available for R3.3.0
R tcga tcgabiolinks written 2.0 years ago by j.ritchie0 • updated 2.0 years ago by Martin Morgan ♦♦ 21k
0
votes
0
answers
351
views
0
answers
1
vote
1
answer
542
views
1
answer
Error on creation of DESEq2 object
deseq2 tcga written 19 months ago by jarod_v6@libero.it40 • updated 19 months ago by Michael Love18k
0
votes
0
answers
309
views
0
answers
24
votes
3
answers
1.9k
views
9 follow
3
answers
0
votes
1
answer
932
views
1
answer
Extract gene expression values from GDCprepare object
tcga tcgabiolinks tcgadownload gdcprepare gdc written 16 months ago by enigmargs0 • updated 15 months ago by tiagochst130
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