17
votes
1
answer
336
views
6 follow
1
answer
How to check the read length for all the TCGA data samples in GDC?
tcga wes gdc gdc data written 5 months ago by Biologist70 • updated 5 months ago by Sean Davis21k
13
votes
6
answers
7.2k
views
8 follow
6
answers
7
votes
3
answers
2.5k
views
3
answers
5
votes
2
answers
2.5k
views
2
answers
0
votes
0
answers
1.6k
views
0
answers
1
vote
1
answer
3.5k
views
1
answer
Differential Analysis for gene expression from TCGA (Level 3)
microarray limma tcga written 3.4 years ago by hudacdif0 • updated 3.4 years ago by Steve Lianoglou12k
0
votes
2
answers
1.8k
views
2
answers
0
votes
0
answers
2.0k
views
0
answers
1
vote
3
answers
2.1k
views
3
answers
0
votes
0
answers
425
views
0
answers
RNAseq binary transformation
rnaseq tcga binary written 3.4 years ago by ezz0
0
votes
1
answer
745
views
1
answer
Mapping of two different regions to one gene symbol
tcga cnv written 3.3 years ago by NS30 • updated 3.3 years ago by Marc Carlson7.2k
4
votes
1
answer
1.6k
views
1
answer
DESeq2 - design for TCGA level 3 data
deseq2 tcga multiple factor design experimental design written 3.3 years ago by anand m t40 • updated 3.3 years ago by Michael Love19k
1
vote
2
answers
1.3k
views
2
answers
R Text progress bar error
tcga written 2.7 years ago by devyani660
0
votes
1
answer
663
views
1
answer
mutational signatures problems
annotation bsgenome somaticsignatures readvcf tcga written 2.5 years ago by jolligoodfellow0 • updated 2.5 years ago by Julian Gehring1.3k
0
votes
0
answers
419
views
0
answers
0
votes
1
answer
422
views
1
answer
TCGAvisualize_EAbarplot Function Issue
tcga written 2.5 years ago by pgreylin0 • updated 11 months ago by eshelden20
0
votes
1
answer
587
views
1
answer
Differential gene expression analysis for GSE62944
cancer limma R bioconductor tcga written 2.5 years ago by hamda.binte.ajmal0 • updated 2.5 years ago by Valerie Obenchain ♦♦ 6.6k
0
votes
1
answer
513
views
1
answer
2
votes
1
answer
552
views
1
answer
0
votes
0
answers
697
views
0
answers
TCGABiolinks not available for R3.3.0
R tcga tcgabiolinks written 2.3 years ago by j.ritchie0 • updated 2.3 years ago by Martin Morgan ♦♦ 22k
0
votes
0
answers
372
views
0
answers
1
vote
1
answer
611
views
1
answer
Error on creation of DESEq2 object
deseq2 tcga written 22 months ago by jarod_v6@libero.it40 • updated 22 months ago by Michael Love19k
0
votes
0
answers
345
views
0
answers
24
votes
3
answers
2.3k
views
9 follow
3
answers
0
votes
1
answer
1.1k
views
1
answer
Extract gene expression values from GDCprepare object
tcga tcgabiolinks tcgadownload gdcprepare gdc written 19 months ago by enigmargs0 • updated 18 months ago by tiagochst150
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