13
votes
6
answers
5.9k
views
8 follow
6
answers
1
vote
1
answer
2.9k
views
1
answer
Differential Analysis for gene expression from TCGA (Level 3)
microarray limma tcga written 2.7 years ago by hudacdif0 • updated 2.7 years ago by Steve Lianoglou12k
5
votes
2
answers
2.1k
views
2
answers
7
votes
3
answers
2.1k
views
3
answers
0
votes
0
answers
1.7k
views
0
answers
1
vote
3
answers
1.7k
views
3
answers
0
votes
1
answer
1.5k
views
1
answer
24
votes
3
answers
1.3k
views
9 follow
3
answers
0
votes
0
answers
1.3k
views
0
answers
4
votes
1
answer
1.2k
views
1
answer
DESeq2 - design for TCGA level 3 data
deseq2 tcga multiple factor design experimental design written 2.7 years ago by anand m t40 • updated 2.7 years ago by Michael Love15k
1
vote
2
answers
927
views
2
answers
R Text progress bar error
tcga written 2.0 years ago by devyani660
1
vote
0
answers
708
views
0
answers
0
votes
1
answer
630
views
1
answer
Mapping of two different regions to one gene symbol
tcga cnv written 2.7 years ago by NS10 • updated 2.7 years ago by Marc Carlson7.2k
0
votes
1
answer
615
views
1
answer
Extract gene expression values from GDCprepare object
tcga tcgabiolinks tcgadownload gdcprepare gdc written 11 months ago by enigmargs0 • updated 9 months ago by tiagochst110
0
votes
0
answers
522
views
0
answers
TCGABiolinks not available for R3.3.0
R tcga tcgabiolinks written 19 months ago by j.ritchie0 • updated 19 months ago by Martin Morgan ♦♦ 21k
0
votes
1
answer
515
views
1
answer
mutational signatures problems
annotation bsgenome somaticsignatures readvcf tcga written 22 months ago by jolligoodfellow0 • updated 22 months ago by Julian Gehring1.3k
0
votes
0
answers
496
views
0
answers
2
votes
1
answer
493
views
1
answer
0
votes
1
answer
448
views
1
answer
Differential gene expression analysis for GSE62944
cancer limma R bioconductor tcga written 21 months ago by hamda.binte.ajmal0 • updated 21 months ago by Valerie Obenchain ♦♦ 6.4k
2
votes
1
answer
437
views
1
answer
0
votes
1
answer
408
views
1
answer
0
votes
0
answers
379
views
0
answers
RNAseq binary transformation
rnaseq tcga binary written 2.7 years ago by ezz0
1
vote
1
answer
351
views
1
answer
Error on creation of DESEq2 object
deseq2 tcga written 13 months ago by jarod_v6@libero.it40 • updated 13 months ago by Michael Love15k
0
votes
1
answer
324
views
1
answer
TCGAvisualize_EAbarplot Function Issue
tcga written 22 months ago by pgreylin0 • updated 3 months ago by eshelden20
0
votes
0
answers
317
views
0
answers
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