0
votes
0
answers
40
views
0
answers
0
votes
1
answer
55
views
1
answer
TxDb basic question
txdb txdb.mmulatta.ucsc.rhemac8.refgene written 21 days ago by Brian Smith120 • updated 11 days ago by daniel.vantwisk30
0
votes
2
answers
93
views
2
answers
Merging each element of a list of Genomic range
granges R txdb cds orf written 4 weeks ago by q.thomas0 • updated 4 weeks ago by James W. MacDonald46k
0
votes
0
answers
150
views
0
answers
1
vote
1
answer
167
views
1
answer
Extract genomic features from a TxDb-like object
genomicfeatures getpromoterseq promoter txdb written 4 months ago by rbenel0 • updated 4 months ago by Hervé Pagès ♦♦ 13k
0
votes
0
answers
285
views
0
answers
2
votes
2
answers
451
views
2
answers
2
votes
2
answers
275
views
2
answers
0
votes
4
answers
287
views
4
answers
Cannot extract TxFeatures for a defined GRanges object
genomicfeatures genomicranges txdb written 8 months ago by oolongoni10 • updated 8 months ago by Hervé Pagès ♦♦ 13k
0
votes
0
answers
199
views
0
answers
0
votes
1
answer
231
views
1
answer
3
votes
3
answers
223
views
3
answers
0
votes
2
answers
722
views
2
answers
0
votes
0
answers
237
views
0
answers
makeTxDbFromGFF Error due to incompatible seqnames
genomicfeatures gtf txdb summarizedexperiment written 12 months ago by filipeje0 • updated 12 months ago by Michael Love18k
0
votes
1
answer
306
views
1
answer
5
votes
1
answer
496
views
1
answer
Possible error in TxDb.Mmusculus.UCSC.mm10.ensGene_3.4.0?
genomicfeatures txdb written 16 months ago by Chao-Jen Wong30 • updated 16 months ago by James W. MacDonald46k
2
votes
1
answer
334
views
1
answer
0
votes
1
answer
271
views
1
answer
Error in TxDb mm10 coordinates?
txdb txdb.mmusculus.ucsc.mm10.knowngene written 19 months ago by Mark10 • updated 19 months ago by James W. MacDonald46k
3
votes
1
answer
330
views
1
answer
1
vote
1
answer
1.2k
views
1
answer
4
votes
1
answer
377
views
1
answer
0
votes
1
answer
361
views
1
answer
0
votes
2
answers
347
views
2
answers
how to get transcript annotation (unique)
txdb written 2.2 years ago by K50
7
votes
2
answers
992
views
2
answers
0
votes
0
answers
441
views
0
answers
extractUpstreamSeqs with custom genome, no gene_id shown
featureextraction genomicfeatures genomicranges txdb written 2.3 years ago by wd10 • updated 2.3 years ago by Martin Morgan ♦♦ 22k
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