Showing: txdbreset
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the coordinates of exons of RefSeq or ENSEMBL genes
txdb exons genome written 10 weeks ago by Bogdan580 • updated 10 weeks ago by Martin Morgan ♦♦ 23k
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1
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129
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Warning in makeTxDbFromGFF
txdb written 3 months ago by weir0 • updated 3 months ago by Hervé Pagès ♦♦ 14k
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332
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TxDb basic question
txdb txdb.mmulatta.ucsc.rhemac8.refgene written 15 months ago by Brian Smith120 • updated 15 months ago by daniel.vantwisk50
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441
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Merging each element of a list of Genomic range
granges R txdb cds orf written 16 months ago by q.thomas0 • updated 16 months ago by James W. MacDonald51k
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455
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1
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Extract genomic features from a TxDb-like object
genomicfeatures getpromoterseq promoter txdb written 19 months ago by rbenel0 • updated 19 months ago by Hervé Pagès ♦♦ 14k
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Cannot extract TxFeatures for a defined GRanges object
genomicfeatures genomicranges txdb written 24 months ago by oolongoni10 • updated 23 months ago by Hervé Pagès ♦♦ 14k
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makeTxDbFromGFF Error due to incompatible seqnames
genomicfeatures gtf txdb summarizedexperiment written 2.2 years ago by filipeje0 • updated 2.2 years ago by Michael Love25k
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558
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5
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856
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Possible error in TxDb.Mmusculus.UCSC.mm10.ensGene_3.4.0?
genomicfeatures txdb written 2.6 years ago by Chao-Jen Wong30 • updated 2.6 years ago by James W. MacDonald51k
2
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493
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1
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0
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1
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457
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Error in TxDb mm10 coordinates?
txdb txdb.mmusculus.ucsc.mm10.knowngene written 2.9 years ago by Mark10 • updated 2.9 years ago by James W. MacDonald51k
3
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1
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518
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