Showing: txdbreset
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Error in TxDb mm10 coordinates?
txdb txdb.mmusculus.ucsc.mm10.knowngene written 3.0 years ago by Mark10 • updated 3.0 years ago by James W. MacDonald51k
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Possible error in TxDb.Mmusculus.UCSC.mm10.ensGene_3.4.0?
genomicfeatures txdb written 2.7 years ago by Chao-Jen Wong30 • updated 2.7 years ago by James W. MacDonald51k
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Extract genomic features from a TxDb-like object
genomicfeatures getpromoterseq promoter txdb written 20 months ago by rbenel0 • updated 20 months ago by Hervé Pagès ♦♦ 14k
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TxDb basic question
txdb txdb.mmulatta.ucsc.rhemac8.refgene written 17 months ago by Brian Smith120 • updated 16 months ago by daniel.vantwisk50
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Warning in makeTxDbFromGFF
txdb written 5 months ago by weir0 • updated 5 months ago by Hervé Pagès ♦♦ 14k
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extractUpstreamSeqs with custom genome, no gene_id shown
featureextraction genomicfeatures genomicranges txdb written 3.6 years ago by wd30 • updated 3.6 years ago by Martin Morgan ♦♦ 24k
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makeTxDbFromGFF Error due to incompatible seqnames
genomicfeatures gtf txdb summarizedexperiment written 2.4 years ago by filipeje0 • updated 2.4 years ago by Michael Love26k
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