0
votes
1
answer
91
views
1
answer
0
votes
1
answer
89
views
1
answer
TxDb basic question
txdb txdb.mmulatta.ucsc.rhemac8.refgene written 12 weeks ago by Brian Smith120 • updated 10 weeks ago by daniel.vantwisk30
0
votes
2
answers
123
views
2
answers
Merging each element of a list of Genomic range
granges R txdb cds orf written 3 months ago by q.thomas0 • updated 3 months ago by James W. MacDonald47k
0
votes
0
answers
217
views
0
answers
1
vote
1
answer
204
views
1
answer
Extract genomic features from a TxDb-like object
genomicfeatures getpromoterseq promoter txdb written 6 months ago by rbenel0 • updated 6 months ago by Hervé Pagès ♦♦ 13k
0
votes
0
answers
411
views
0
answers
2
votes
2
answers
534
views
2
answers
2
votes
2
answers
403
views
2
answers
0
votes
4
answers
327
views
4
answers
Cannot extract TxFeatures for a defined GRanges object
genomicfeatures genomicranges txdb written 11 months ago by oolongoni10 • updated 10 months ago by Hervé Pagès ♦♦ 13k
0
votes
0
answers
232
views
0
answers
0
votes
1
answer
268
views
1
answer
3
votes
3
answers
255
views
3
answers
0
votes
2
answers
748
views
2
answers
0
votes
0
answers
274
views
0
answers
makeTxDbFromGFF Error due to incompatible seqnames
genomicfeatures gtf txdb summarizedexperiment written 14 months ago by filipeje0 • updated 14 months ago by Michael Love19k
0
votes
1
answer
337
views
1
answer
5
votes
1
answer
551
views
1
answer
Possible error in TxDb.Mmusculus.UCSC.mm10.ensGene_3.4.0?
genomicfeatures txdb written 18 months ago by Chao-Jen Wong30 • updated 18 months ago by James W. MacDonald47k
2
votes
1
answer
357
views
1
answer
0
votes
1
answer
295
views
1
answer
Error in TxDb mm10 coordinates?
txdb txdb.mmusculus.ucsc.mm10.knowngene written 22 months ago by Mark10 • updated 22 months ago by James W. MacDonald47k
3
votes
1
answer
354
views
1
answer
1
vote
1
answer
1.3k
views
1
answer
4
votes
1
answer
405
views
1
answer
0
votes
1
answer
416
views
1
answer
0
votes
2
answers
374
views
2
answers
how to get transcript annotation (unique)
txdb written 2.4 years ago by K50
7
votes
2
answers
1.1k
views
2
answers
0
votes
0
answers
464
views
0
answers
extractUpstreamSeqs with custom genome, no gene_id shown
featureextraction genomicfeatures genomicranges txdb written 2.4 years ago by wd10 • updated 2.4 years ago by Martin Morgan ♦♦ 22k
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