2
votes
2
answers
87
views
2
answers
0
votes
4
answers
134
views
4
answers
Cannot extract TxFeatures for a defined GRanges object
genomicfeatures genomicranges txdb written 4 weeks ago by oolongoni10 • updated 23 days ago by Hervé Pagès ♦♦ 13k
0
votes
0
answers
50
views
0
answers
0
votes
1
answer
75
views
1
answer
3
votes
3
answers
115
views
3
answers
0
votes
2
answers
622
views
2
answers
0
votes
0
answers
125
views
0
answers
0
votes
1
answer
193
views
1
answer
5
votes
1
answer
313
views
1
answer
Possible error in TxDb.Mmusculus.UCSC.mm10.ensGene_3.4.0?
genomicfeatures txdb written 8 months ago by Chao-Jen Wong30 • updated 8 months ago by James W. MacDonald45k
2
votes
1
answer
236
views
1
answer
0
votes
1
answer
184
views
1
answer
Error in TxDb mm10 coordinates?
txdb txdb.mmusculus.ucsc.mm10.knowngene written 11 months ago by Mark10 • updated 11 months ago by James W. MacDonald45k
3
votes
1
answer
271
views
1
answer
1
vote
1
answer
951
views
1
answer
4
votes
1
answer
293
views
1
answer
0
votes
1
answer
272
views
1
answer
0
votes
2
answers
258
views
2
answers
how to get transcript annotation (unique)
txdb written 19 months ago by K40
7
votes
2
answers
665
views
2
answers
0
votes
0
answers
311
views
0
answers
extractUpstreamSeqs with custom genome, no gene_id shown
featureextraction genomicfeatures genomicranges txdb written 19 months ago by wd10 • updated 19 months ago by Martin Morgan ♦♦ 20k
4
votes
1
answer
472
views
1
answer
0
votes
1
answer
367
views
1
answer
How to find index position of desired feature_by in TxDb granges?
genomicfeatures granges txdb written 20 months ago by vinod.acear20 • updated 20 months ago by Martin Morgan ♦♦ 20k
2
votes
1
answer
346
views
1
answer
1
vote
1
answer
463
views
1
answer
problem creating txdb object and bsgenome for solanum pennellii
bsgenome promoter txdb written 21 months ago by sekawaiwai200620 • updated 21 months ago by Martin Morgan ♦♦ 20k
0
votes
1
answer
443
views
1
answer
extracting promoter region error for A.thaliana
txdb promoter region written 22 months ago by sekawaiwai200620 • updated 22 months ago by Martin Morgan ♦♦ 20k
4
votes
1
answer
701
views
1
answer
0
votes
3
answers
378
views
3
answers
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