3
votes
1
answer
1.9k
views
1
answer
Installation of TxDb.Hsapiens.UCSC.hg19.knownGene fails.
biocinstaller installation txdb written 3.7 years ago by Laurent Gatto1.0k • updated 3.7 years ago by Marc Carlson7.2k
1
vote
1
answer
1.3k
views
1
answer
7
votes
2
answers
1.1k
views
2
answers
0
votes
1
answer
1.1k
views
1
answer
4
votes
1
answer
994
views
1
answer
2
votes
2
answers
936
views
2
answers
7
votes
6
answers
798
views
6
answers
Setting package name in makeTxDbPackage
genomicfeatures txdb written 3.4 years ago by Diego Diez730 • updated 3.4 years ago by Marc Carlson7.2k
4
votes
1
answer
781
views
1
answer
0
votes
2
answers
765
views
2
answers
2
votes
1
answer
664
views
1
answer
Setting genome information on a TxDb object
genomicfeatures txdb written 3.4 years ago by Diego Diez730 • updated 3.4 years ago by Hervé Pagès ♦♦ 13k
0
votes
1
answer
635
views
1
answer
extracting promoter region error for A.thaliana
txdb promoter region written 2.7 years ago by sekawaiwai200620 • updated 2.7 years ago by Martin Morgan ♦♦ 22k
1
vote
1
answer
615
views
1
answer
problem creating txdb object and bsgenome for solanum pennellii
bsgenome promoter txdb written 2.7 years ago by sekawaiwai200620 • updated 2.7 years ago by Martin Morgan ♦♦ 22k
0
votes
2
answers
592
views
2
answers
5
votes
1
answer
573
views
1
answer
Possible error in TxDb.Mmusculus.UCSC.mm10.ensGene_3.4.0?
genomicfeatures txdb written 19 months ago by Chao-Jen Wong30 • updated 19 months ago by James W. MacDonald48k
2
votes
2
answers
573
views
2
answers
0
votes
1
answer
537
views
1
answer
How to find index position of desired feature_by in TxDb granges?
genomicfeatures granges txdb written 2.6 years ago by vinod.acear30 • updated 2.6 years ago by Martin Morgan ♦♦ 22k
2
votes
1
answer
495
views
1
answer
0
votes
3
answers
477
views
3
answers
0
votes
0
answers
471
views
0
answers
extractUpstreamSeqs with custom genome, no gene_id shown
featureextraction genomicfeatures genomicranges txdb written 2.5 years ago by wd10 • updated 2.5 years ago by Martin Morgan ♦♦ 22k
0
votes
0
answers
465
views
0
answers
2
votes
2
answers
451
views
2
answers
0
votes
1
answer
425
views
1
answer
4
votes
1
answer
417
views
1
answer
0
votes
2
answers
413
views
2
answers
0
votes
2
answers
388
views
2
answers
how to get transcript annotation (unique)
txdb written 2.5 years ago by K50
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