Showing: txdbreset
3
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1
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2.4k
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1
answer
Installation of TxDb.Hsapiens.UCSC.hg19.knownGene fails.
biocinstaller installation txdb written 4.8 years ago by Laurent Gatto1.2k • updated 4.7 years ago by Marc Carlson7.2k
2
votes
1
answer
829
views
1
answer
Setting genome information on a TxDb object
genomicfeatures txdb written 4.4 years ago by Diego Diez730 • updated 4.4 years ago by Hervé Pagès ♦♦ 14k
7
votes
6
answers
1.0k
views
6
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Setting package name in makeTxDbPackage
genomicfeatures txdb written 4.4 years ago by Diego Diez730 • updated 4.4 years ago by Marc Carlson7.2k
0
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1
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1.3k
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1
answer
2
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2
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1.3k
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2
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0
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2
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747
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2
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0
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2
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523
views
2
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0
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3
answers
646
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3
answers
4
votes
1
answer
1.3k
views
1
answer
0
votes
1
answer
824
views
1
answer
extracting promoter region error for A.thaliana
txdb promoter region written 3.7 years ago by sekawaiwai200620 • updated 3.7 years ago by Martin Morgan ♦♦ 23k
1
vote
1
answer
784
views
1
answer
problem creating txdb object and bsgenome for solanum pennellii
bsgenome promoter txdb written 3.7 years ago by sekawaiwai200620 • updated 3.7 years ago by Martin Morgan ♦♦ 23k
2
votes
1
answer
637
views
1
answer
0
votes
1
answer
697
views
1
answer
How to find index position of desired feature_by in TxDb granges?
genomicfeatures granges txdb written 3.6 years ago by vinod.acear40 • updated 3.6 years ago by Martin Morgan ♦♦ 23k
4
votes
1
answer
1.0k
views
1
answer
0
votes
0
answers
588
views
0
answers
extractUpstreamSeqs with custom genome, no gene_id shown
featureextraction genomicfeatures genomicranges txdb written 3.5 years ago by wd30 • updated 3.5 years ago by Martin Morgan ♦♦ 23k
7
votes
2
answers
1.6k
views
2
answers
0
votes
2
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558
views
2
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how to get transcript annotation (unique)
txdb written 3.5 years ago by K50
0
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1
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607
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1
answer
4
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1
answer
558
views
1
answer
1
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1
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1.5k
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1
answer
3
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1
answer
519
views
1
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0
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1
answer
458
views
1
answer
Error in TxDb mm10 coordinates?
txdb txdb.mmusculus.ucsc.mm10.knowngene written 2.9 years ago by Mark10 • updated 2.9 years ago by James W. MacDonald51k
2
votes
1
answer
494
views
1
answer
5
votes
1
answer
859
views
1
answer
Possible error in TxDb.Mmusculus.UCSC.mm10.ensGene_3.4.0?
genomicfeatures txdb written 2.6 years ago by Chao-Jen Wong30 • updated 2.6 years ago by James W. MacDonald51k
0
votes
1
answer
561
views
1
answer
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