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Correlation of gene expression values using tpms and normalized counts
deseq2 tximport written 2 days ago by taliaferrojm • 0 • updated 2 days ago by Michael Love ♦ 23k
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47
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Tximport and pseudo alignment with Kallisto
deseq2 tximport kallisto written 4 days ago by maria • 10 • updated 4 days ago by Michael Love ♦ 23k
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103
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Correct use of tximport in combination with edgeR cpm()
edger tximport written 4 days ago by ATpoint • 0 • updated 4 days ago by James W. MacDonald ♦ 50k
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34
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Robust FPM with normalization factors (from tximport)?
normalization deseq2 tximport written 12 days ago by Roger • 0 • updated 12 days ago by Michael Love ♦ 23k
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55
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output of the function "makeCountsFromAbundance"
tximport written 19 days ago by capricygcapricyg • 0 • updated 19 days ago by James W. MacDonald ♦ 50k
2
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1
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83
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tximport, Kallisto and Deseq2 (quick answer)
deseq2 counts tximport kallisto written 24 days ago by maria • 10 • updated 23 days ago by Michael Love ♦ 23k
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70
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tximport and txOut
deseq2 tximport written 24 days ago by Merlin • 10 • updated 24 days ago by Michael Love ♦ 23k
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