Showing: tximportreset
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Trouble with Tximport
salmon tximport written 3.0 years ago by smithng121530 • updated 3.0 years ago by Michael Love22k
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should I use rsem's summary to genes or tximport's?
tximport written 2.9 years ago by ty.thomson10 • updated 2.9 years ago by Michael Love22k
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Problem with tximport(reader = read_tsv) and workaround
tximport readr read_tsv written 2.6 years ago by Jenny Drnevich1.9k • updated 2.6 years ago by Michael Love22k
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DESeqDataSetFromTximport with kallisto abundances.
deseq2 tximport written 22 months ago by ben30 • updated 18 months ago by Ming Wang0
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PCA from TPM
pca tpm tximport written 17 months ago by tanyabioinfo20
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tximport gene name
tximport written 17 months ago by tanyabioinfo20 • updated 17 months ago by Ed Siefker220
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Gene level exploratory data analysis from tximport results
edger deseq2 tximport written 2.8 years ago by Steve Lianoglou12k • updated 2.8 years ago by Michael Love22k
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Is there any point to TMM-normalize TPM prior to limma-voom?
edger voom tximport limma-voom written 2.1 years ago by johnmcma10 • updated 2.1 years ago by Ryan C. Thompson7.2k
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unable to get tximport to work on data from kallisto
tximport kallisto written 23 months ago by swamyvinny10 • updated 23 months ago by Steve Lianoglou12k
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How to get DESeq2 sizefactors from data imported using tximport
deseq2 sailfish tximport written 21 months ago by stan0 • updated 21 months ago by Michael Love22k
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RNAseq tximport Deseq2
deseq2 tximport written 16 months ago by tanyabioinfo20 • updated 16 months ago by Michael Love22k
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Subsetting a tximport object
tximport written 13 months ago by scanchi0 • updated 13 months ago by jennietodd1410
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0
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Tutorial: Importing multiple .h5 files using tximport
tutorial tximport written 11 months ago by nelson.s.garcia0 • updated 11 months ago by Steve Lianoglou12k
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How to filter tximport output for edgeR?
edger rna-seq salmon tximport written 2.5 years ago by Peter0 • updated 2.5 years ago by Michael Love22k
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Non-integer counts from tximport OK for edgeR / DESeq2?
edger deseq2 tximport written 2.5 years ago by Jenny Drnevich1.9k • updated 2.5 years ago by Michael Love22k
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txImport: a gene seems missing from the sample data
tximport tximportdata written 2.1 years ago by alexlok0 • updated 2.1 years ago by Michael Love22k
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tximport - using hg38 with RefSeq (NM) and Gene Symbol
salmon hg38 tximport tx2gene.csv written 2.1 years ago by seb.boegel0 • updated 2.1 years ago by Michael Love22k
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