Showing: tximportreset
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Trouble with Tximport
salmon tximport written 3.5 years ago by smithng121530 • updated 3.5 years ago by Michael Love25k
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should I use rsem's summary to genes or tximport's?
tximport written 3.4 years ago by ty.thomson10 • updated 3.4 years ago by Michael Love25k
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running tximport for salmon quants
tximport readr written 3.3 years ago by Hadi Gharibi0 • updated 3.3 years ago by Michael Love25k
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Gene level exploratory data analysis from tximport results
edger deseq2 tximport written 3.3 years ago by Steve Lianoglou12k • updated 3.3 years ago by Michael Love25k
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Any trick to use "tximport" for converting a simple read count table ?
tximport written 3.1 years ago by Akira Imamoto0 • updated 3.1 years ago by Michael Love25k
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Problem with tximport(reader = read_tsv) and workaround
tximport readr read_tsv written 3.1 years ago by Jenny Drnevich1.9k • updated 3.1 years ago by Michael Love25k
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How to filter tximport output for edgeR?
edger rna-seq salmon tximport written 3.0 years ago by Peter0 • updated 3.0 years ago by Michael Love25k
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Non-integer counts from tximport OK for edgeR / DESeq2?
edger deseq2 tximport written 3.0 years ago by Jenny Drnevich1.9k • updated 3.0 years ago by Michael Love25k
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Using tximport to read in data from sailfish experiment
rnaseq sailfish tximport written 3.0 years ago by lina.faller0 • updated 3.0 years ago by Michael Love25k
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RNA-seq analysis without replicates using tximport and DESeq2
rnaseq deseq2 tximport written 2.9 years ago by Endre Sebestyen60 • updated 2.9 years ago by Michael Love25k
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tximport RSEM error
tximport written 2.8 years ago by ribioinfo90 • updated 2.8 years ago by Michael Love25k
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How to remove genes with 0 counts in tximport?
deseq deseq2 tximport tximportdata written 2.7 years ago by Peter Alto10 • updated 2.7 years ago by Michael Love25k
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txImport: a gene seems missing from the sample data
tximport tximportdata written 2.6 years ago by alexlok0 • updated 2.6 years ago by Michael Love25k
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tximport - using hg38 with RefSeq (NM) and Gene Symbol
salmon hg38 tximport tx2gene.csv written 2.6 years ago by seb.boegel0 • updated 2.6 years ago by Michael Love25k
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tximport error reading salmon quantification files...
salmon tximport written 2.6 years ago by nschurch10 • updated 2.6 years ago by James W. MacDonald51k
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