Showing: tximportreset
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tximport from Galaxy output
normalization tximport written 2 days ago by agustin.gonvi10 • updated 2 days ago by Michael Love24k
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47
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Importing Salmon counts with tximport with host and virus genomes
salmon tximport written 5 days ago by rbenel0 • updated 5 days ago by Michael Love24k
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63
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tximport discrepancy between TPMs and lengthScaledTPMs
tximport written 5 days ago by igor20 • updated 5 days ago by Michael Love24k
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27
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inferential replicates in Kallisto when summarising values via tximport
tximport written 6 days ago by Mozart10 • updated 6 days ago by Michael Love24k
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73
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how to set offset matrix to Deseq2 differential analysis
deseq2 tximport kallisto written 19 days ago by qwzhang06010 • updated 19 days ago by Michael Love24k
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69
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Salmon / tximport
deseq2 tximport written 21 days ago by polaxgr10 • updated 21 days ago by Michael Love24k
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88
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5
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192
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Correct use of tximport in combination with edgeR cpm()
edger tximport written 5 weeks ago by ATpoint10 • updated 5 weeks ago by James W. MacDonald50k
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76
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Tximport and pseudo alignment with Kallisto
deseq2 tximport kallisto written 5 weeks ago by Mozart10 • updated 5 weeks ago by Michael Love24k
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53
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Robust FPM with normalization factors (from tximport)?
normalization deseq2 tximport written 6 weeks ago by Roger0 • updated 6 weeks ago by Michael Love24k
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71
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output of the function "makeCountsFromAbundance"
tximport written 7 weeks ago by capricygcapricyg0 • updated 7 weeks ago by James W. MacDonald50k
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105
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tximport, Kallisto and Deseq2 (quick answer)
deseq2 counts tximport kallisto written 8 weeks ago by Mozart10 • updated 8 weeks ago by Michael Love24k
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83
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tximport and txOut
deseq2 tximport written 8 weeks ago by Merlin 10 • updated 8 weeks ago by Michael Love24k
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82
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1
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122
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1
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105
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dtuScaledTPM vs lengthScaledTPM in DTU analysis
salmon tpm tximport dtu rnaseqdtu written 11 weeks ago by fiona.dick9110 • updated 11 weeks ago by Michael Love24k
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112
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quant.sf files and tximport, transcripts not recognized
salmon tximport written 11 weeks ago by Merlin 10 • updated 11 weeks ago by Michael Love24k
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124
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0
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124
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2
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150
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Salmon (quant.sf) to tximport error
tximport written 3 months ago by Merlin 10 • updated 3 months ago by Michael Love24k
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158
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Normalisation for count data visualisation only
normalization deseq2 salmon tximport written 3 months ago by Alex So0 • updated 3 months ago by Michael Love24k
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119
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Counts, abundance in Tximport
tximport written 3 months ago by hong0
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307
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0
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143
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[deseq2] normalization between samples after merging transcripts into genes
deseq2 tximport written 4 months ago by marie0 • updated 4 months ago by Michael Love24k
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