3
votes
1
answer
41
views
1
answer
Problem when transforming Platypus vcf to VRanges
variantannotation vcf readvcf vranges written 14 days ago by david.mas0 • updated 14 days ago by Michael Lawrence10k
3
votes
1
answer
70
views
1
answer
0
votes
1
answer
43
views
1
answer
Error: invalid class "VRanges" object
variantannotation R rle vranges written 23 days ago by Jayendra Shinde0 • updated 22 days ago by Valerie Obenchain ♦♦ 6.5k
0
votes
1
answer
56
views
1
answer
0
votes
1
answer
78
views
1
answer
filtering a VCF file based on genotype
variantannotation written 9 weeks ago by Bogdan490 • updated 8 weeks ago by Valerie Obenchain ♦♦ 6.5k
0
votes
0
answers
72
views
0
answers
0
votes
0
answers
122
views
0
answers
2
votes
1
answer
173
views
1
answer
0
votes
1
answer
603
views
1
answer
Problem using biocLite() to update packages
variantannotation biocinstaller bioclite written 8 months ago by Jenny Drnevich1.9k • updated 8 months ago by James W. MacDonald46k
0
votes
0
answers
186
views
0
answers
6
votes
2
answers
509
views
2
answers
BiocGenerics built with R 3.4.2 changes behaviour
variantannotation iranges biocgenerics written 9 months ago by ginggs30 • updated 9 months ago by Hervé Pagès ♦♦ 13k
7
votes
2
answers
451
views
2
answers
5
votes
2
answers
402
views
2
answers
SNP location annotation problem in "VariantAnnotation" package
variantannotation annotation written 10 months ago by yduan00420 • updated 10 months ago by Valerie Obenchain ♦♦ 6.5k
0
votes
1
answer
413
views
1
answer
Translation Error in predictCoding() for VariantAnnotation
variantannotation written 10 months ago by creasyt0 • updated 10 months ago by Hervé Pagès ♦♦ 13k
0
votes
2
answers
483
views
2
answers
2
votes
1
answer
657
views
1
answer
0
votes
0
answers
406
views
0
answers
0
votes
1
answer
276
views
1
answer
0
votes
1
answer
220
views
1
answer
3
votes
2
answers
284
views
2
answers
No annotation for single SNPs
variantannotation snps ucsc txdb.hsapiens.ucsc.hg19.knowngene written 13 months ago by Lna0 • updated 13 months ago by Valerie Obenchain ♦♦ 6.5k
0
votes
1
answer
336
views
1
answer
Error using readVcf
variantannotation gwastools written 13 months ago by Lna0 • updated 13 months ago by Stephanie M. Gogarten560
3
votes
1
answer
345
views
1
answer
VariantAnnotation Installation Failure
variantannotation written 13 months ago by andrew.j.skelton73310 • updated 13 months ago by Valerie Obenchain ♦♦ 6.5k
1
vote
1
answer
272
views
1
answer
Exclude Mutations from Mutation List
variantannotation written 14 months ago by Haiying.Kong100 • updated 14 months ago by Martin Morgan ♦♦ 22k
2
votes
1
answer
381
views
1
answer
extracting Allele Read Counts - part2
variantannotation rsamtools written 15 months ago by Bogdan490 • updated 15 months ago by James W. MacDonald46k
0
votes
1
answer
407
views
1
answer
Error in c(DataFrameList(META = meta), tbls[unique(tags)])
variantannotation written 15 months ago by ddzhangzz0 • updated 15 months ago by Hervé Pagès ♦♦ 13k
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