0
votes
1
answer
57
views
1
answer
How to prepare .vcf for seqCAT
variantannotation gatk seqcat written 12 days ago by abe0 • updated 11 days ago by erikfas0
0
votes
1
answer
53
views
1
answer
writeVcf save invalid vcf with metadata out of order
variantannotation written 26 days ago by alessandro.pastore20 • updated 22 days ago by Valerie Obenchain ♦♦ 6.7k
0
votes
2
answers
148
views
2
answers
Data from ##SAMPLE lines in VCF?
variantannotation coldata written 11 weeks ago by lvclark0 • updated 10 weeks ago by Valerie Obenchain ♦♦ 6.7k
3
votes
1
answer
171
views
1
answer
3
votes
1
answer
120
views
1
answer
Problem when transforming Platypus vcf to VRanges
variantannotation vcf readvcf vranges written 5 months ago by david.mas0 • updated 5 months ago by Michael Lawrence10k
0
votes
1
answer
133
views
1
answer
Error: invalid class "VRanges" object
variantannotation R rle vranges written 5 months ago by Jayendra Shinde0 • updated 5 months ago by Valerie Obenchain ♦♦ 6.7k
0
votes
1
answer
138
views
1
answer
0
votes
1
answer
162
views
1
answer
filtering a VCF file based on genotype
variantannotation written 7 months ago by Bogdan530 • updated 6 months ago by Valerie Obenchain ♦♦ 6.7k
0
votes
0
answers
153
views
0
answers
0
votes
0
answers
194
views
0
answers
2
votes
1
answer
263
views
1
answer
0
votes
1
answer
912
views
1
answer
Problem using biocLite() to update packages
variantannotation biocinstaller bioclite written 13 months ago by Jenny Drnevich1.9k • updated 13 months ago by James W. MacDonald48k
0
votes
0
answers
261
views
0
answers
6
votes
2
answers
632
views
2
answers
BiocGenerics built with R 3.4.2 changes behaviour
variantannotation iranges biocgenerics written 14 months ago by ginggs30 • updated 14 months ago by Hervé Pagès ♦♦ 13k
7
votes
2
answers
502
views
2
answers
SNP location annotation problem in "VariantAnnotation" package
variantannotation annotation written 15 months ago by yduan00420 • updated 15 months ago by Valerie Obenchain ♦♦ 6.7k
0
votes
1
answer
493
views
1
answer
Translation Error in predictCoding() for VariantAnnotation
variantannotation written 15 months ago by creasyt0 • updated 15 months ago by Hervé Pagès ♦♦ 13k
7
votes
2
answers
565
views
2
answers
0
votes
2
answers
575
views
2
answers
0
votes
0
answers
491
views
0
answers
2
votes
1
answer
820
views
1
answer
0
votes
1
answer
336
views
1
answer
0
votes
1
answer
280
views
1
answer
3
votes
2
answers
357
views
2
answers
No annotation for single SNPs
variantannotation snps ucsc txdb.hsapiens.ucsc.hg19.knowngene written 17 months ago by Lna0 • updated 17 months ago by Valerie Obenchain ♦♦ 6.7k
0
votes
1
answer
493
views
1
answer
Error using readVcf
variantannotation gwastools written 18 months ago by Lna0 • updated 18 months ago by Stephanie M. Gogarten570
3
votes
1
answer
521
views
1
answer
VariantAnnotation Installation Failure
variantannotation written 18 months ago by andrew.j.skelton73310 • updated 18 months ago by Valerie Obenchain ♦♦ 6.7k
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