3
votes
1
answer
116
views
1
answer
3
votes
1
answer
74
views
1
answer
Problem when transforming Platypus vcf to VRanges
variantannotation vcf readvcf vranges written 10 weeks ago by david.mas0 • updated 10 weeks ago by Michael Lawrence10k
0
votes
1
answer
83
views
1
answer
Error: invalid class "VRanges" object
variantannotation R rle vranges written 12 weeks ago by Jayendra Shinde0 • updated 12 weeks ago by Valerie Obenchain ♦♦ 6.6k
0
votes
1
answer
87
views
1
answer
0
votes
1
answer
105
views
1
answer
filtering a VCF file based on genotype
variantannotation written 4 months ago by Bogdan510 • updated 4 months ago by Valerie Obenchain ♦♦ 6.6k
0
votes
0
answers
98
views
0
answers
0
votes
0
answers
146
views
0
answers
2
votes
1
answer
208
views
1
answer
0
votes
1
answer
729
views
1
answer
Problem using biocLite() to update packages
variantannotation biocinstaller bioclite written 10 months ago by Jenny Drnevich1.9k • updated 10 months ago by James W. MacDonald47k
0
votes
0
answers
212
views
0
answers
6
votes
2
answers
558
views
2
answers
BiocGenerics built with R 3.4.2 changes behaviour
variantannotation iranges biocgenerics written 11 months ago by ginggs30 • updated 11 months ago by Hervé Pagès ♦♦ 13k
7
votes
2
answers
434
views
2
answers
SNP location annotation problem in "VariantAnnotation" package
variantannotation annotation written 12 months ago by yduan00420 • updated 12 months ago by Valerie Obenchain ♦♦ 6.6k
0
votes
1
answer
444
views
1
answer
Translation Error in predictCoding() for VariantAnnotation
variantannotation written 12 months ago by creasyt0 • updated 12 months ago by Hervé Pagès ♦♦ 13k
7
votes
2
answers
488
views
2
answers
0
votes
2
answers
505
views
2
answers
0
votes
0
answers
440
views
0
answers
2
votes
1
answer
702
views
1
answer
0
votes
1
answer
299
views
1
answer
0
votes
1
answer
241
views
1
answer
3
votes
2
answers
310
views
2
answers
No annotation for single SNPs
variantannotation snps ucsc txdb.hsapiens.ucsc.hg19.knowngene written 15 months ago by Lna0 • updated 15 months ago by Valerie Obenchain ♦♦ 6.6k
0
votes
1
answer
399
views
1
answer
Error using readVcf
variantannotation gwastools written 15 months ago by Lna0 • updated 15 months ago by Stephanie M. Gogarten560
3
votes
1
answer
413
views
1
answer
VariantAnnotation Installation Failure
variantannotation written 16 months ago by andrew.j.skelton73310 • updated 15 months ago by Valerie Obenchain ♦♦ 6.6k
1
vote
1
answer
299
views
1
answer
Exclude Mutations from Mutation List
variantannotation written 16 months ago by Haiying.Kong100 • updated 16 months ago by Martin Morgan ♦♦ 22k
2
votes
1
answer
448
views
1
answer
extracting Allele Read Counts - part2
variantannotation rsamtools written 17 months ago by Bogdan510 • updated 17 months ago by James W. MacDonald47k
0
votes
1
answer
446
views
1
answer
Error in c(DataFrameList(META = meta), tbls[unique(tags)])
variantannotation written 17 months ago by ddzhangzz0 • updated 17 months ago by Hervé Pagès ♦♦ 13k
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