6
votes
2
answers
581
views
2
answers
BiocGenerics built with R 3.4.2 changes behaviour
variantannotation iranges biocgenerics written 12 months ago by ginggs30 • updated 12 months ago by Hervé Pagès ♦♦ 13k
7
votes
1
answer
649
views
1
answer
writeVcf no longer writes records for ungenotyped data
variantannotation written 3.9 years ago by Daniel Cameron40 • updated 3.9 years ago by Valerie Obenchain ♦♦ 6.6k
5
votes
4
answers
1.3k
views
5 follow
4
answers
Error in reading 1000 genomes data
variantannotation written 3.9 years ago by Wade Copeland20 • updated 2.6 years ago by Martin Morgan ♦♦ 22k
2
votes
0
answers
772
views
0
answers
5
votes
1
answer
390
views
1
answer
filter "isSnp" for VCF
variantannotation vcf filtervcf written 3.0 years ago by TimothéeFlutre70 • updated 3.0 years ago by Michael Lawrence10k
1
vote
2
answers
2.5k
views
2
answers
merging VCF files
variantannotation written 5.7 years ago by Valerie Obenchain ♦♦ 6.6k • updated 5.6 years ago by Stephanie M. Gogarten560
2
votes
1
answer
746
views
1
answer
3
votes
1
answer
1.6k
views
1
answer
Quality filtering of exactSNP-generated VCF files
variantannotation exactsnp qc written 3.9 years ago by daniel.silvestre50 • updated 3.9 years ago by Wei Shi2.9k
1
vote
1
answer
1.4k
views
1
answer
4
votes
5
answers
674
views
5
answers
4
votes
3
answers
915
views
3
answers
readVcfAsVRanges + FilterRules
variantannotation readvcfasvranges filtervcf filterrules written 3.6 years ago by Sigve Nakken50 • updated 3.6 years ago by Martin Morgan ♦♦ 22k
7
votes
3
answers
467
views
3
answers
Extracting first member of each element of a matrix of lists
variantannotation vcf written 3.5 years ago by Sean Davis21k • updated 3.4 years ago by Michael Lawrence10k
2
votes
1
answer
529
views
1
answer
a filter works alone but not with other filters
variantannotation vcf filtervcf written 3.0 years ago by TimothéeFlutre70 • updated 3.0 years ago by Martin Morgan ♦♦ 22k
1
vote
1
answer
452
views
1
answer
1
vote
1
answer
491
views
1
answer
Building VariantAnnotation on Windows - Makevars.win error
variantannotation windows makevars.win written 2.5 years ago by simon10 • updated 2.5 years ago by Martin Morgan ♦♦ 22k
4
votes
1
answer
428
views
1
answer
parRapply in BiocParallel ?
variantannotation biocparallel written 2.4 years ago by kevin.rue220 • updated 2.4 years ago by Michael Lawrence10k
1
vote
0
answers
344
views
0
answers
3
votes
1
answer
453
views
1
answer
2
votes
2
answers
365
views
2
answers
1
vote
0
answers
522
views
0
answers
1
vote
1
answer
305
views
1
answer
Exclude Mutations from Mutation List
variantannotation written 17 months ago by Haiying.Kong100 • updated 17 months ago by Martin Morgan ♦♦ 22k
7
votes
2
answers
468
views
2
answers
SNP location annotation problem in "VariantAnnotation" package
variantannotation annotation written 13 months ago by yduan00420 • updated 13 months ago by Valerie Obenchain ♦♦ 6.6k
7
votes
2
answers
517
views
2
answers
0
votes
0
answers
462
views
0
answers
0
votes
0
answers
602
views
0
answers
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