6
votes
2
answers
299
views
2
answers
BiocGenerics built with R 3.4.2 changes behaviour
variantannotation iranges biocgenerics written 3 months ago by ginggs30 • updated 3 months ago by Hervé Pagès ♦♦ 13k
7
votes
1
answer
568
views
1
answer
writeVcf no longer writes records for ungenotyped data
variantannotation written 3.2 years ago by Daniel Cameron40 • updated 3.2 years ago by Valerie Obenchain ♦♦ 6.4k
5
votes
4
answers
1.0k
views
5 follow
4
answers
Error in reading 1000 genomes data
variantannotation written 3.2 years ago by Wade Copeland20 • updated 22 months ago by Martin Morgan ♦♦ 21k
2
votes
0
answers
590
views
0
answers
5
votes
1
answer
328
views
1
answer
filter "isSnp" for VCF
variantannotation vcf filtervcf written 2.3 years ago by TimothéeFlutre70 • updated 2.2 years ago by Michael Lawrence9.9k
1
vote
2
answers
1.8k
views
2
answers
merging VCF files
variantannotation written 5.0 years ago by Valerie Obenchain ♦♦ 6.4k • updated 4.9 years ago by Stephanie M. Gogarten530
2
votes
1
answer
630
views
1
answer
3
votes
1
answer
1.3k
views
1
answer
Quality filtering of exactSNP-generated VCF files
variantannotation exactsnp qc written 3.2 years ago by daniel.silvestre50 • updated 3.2 years ago by Wei Shi2.7k
1
vote
1
answer
1.2k
views
1
answer
4
votes
5
answers
597
views
5
answers
4
votes
3
answers
695
views
3
answers
readVcfAsVRanges + FilterRules
variantannotation readvcfasvranges filtervcf filterrules written 2.9 years ago by Sigve Nakken50 • updated 2.9 years ago by Martin Morgan ♦♦ 21k
7
votes
3
answers
402
views
3
answers
Extracting first member of each element of a matrix of lists
variantannotation vcf written 2.7 years ago by Sean Davis21k • updated 2.7 years ago by Michael Lawrence9.9k
2
votes
1
answer
446
views
1
answer
a filter works alone but not with other filters
variantannotation vcf filtervcf written 2.2 years ago by TimothéeFlutre70 • updated 2.2 years ago by Martin Morgan ♦♦ 21k
1
vote
1
answer
344
views
1
answer
1
vote
1
answer
346
views
1
answer
Building VariantAnnotation on Windows - Makevars.win error
variantannotation windows makevars.win written 21 months ago by simon10 • updated 21 months ago by Martin Morgan ♦♦ 21k
4
votes
1
answer
354
views
1
answer
parRapply in BiocParallel ?
variantannotation biocparallel written 20 months ago by kevin.rue200 • updated 20 months ago by Michael Lawrence9.9k
1
vote
0
answers
262
views
0
answers
3
votes
1
answer
331
views
1
answer
2
votes
2
answers
248
views
2
answers
1
vote
0
answers
350
views
0
answers
1
vote
1
answer
196
views
1
answer
Exclude Mutations from Mutation List
variantannotation written 8 months ago by Haiying.Kong90 • updated 8 months ago by Martin Morgan ♦♦ 21k
5
votes
2
answers
337
views
2
answers
SNP location annotation problem in "VariantAnnotation" package
variantannotation annotation written 4 months ago by yduan00420 • updated 4 months ago by Valerie Obenchain ♦♦ 6.4k
7
votes
2
answers
353
views
2
answers
0
votes
0
answers
378
views
0
answers
0
votes
0
answers
482
views
0
answers
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