Showing: vcfreset
3
votes
2
answers
651
views
2
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5
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2
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627
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2
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extracting Allele Read Counts
rsamtools vcf written 2.5 years ago by Bogdan580
2
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2
answers
622
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2
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0
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1
answer
615
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1
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1
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3
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605
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about filtering variants from a VCF file
vcf written 2.8 years ago by Bogdan580
0
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1
answer
599
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1
answer
0
votes
1
answer
577
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1
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vcfR package vector length error
vcf written 2.9 years ago by jenniewoo20 • updated 2.9 years ago by Martin Morgan ♦♦ 23k
7
votes
3
answers
563
views
3
answers
Extracting first member of each element of a matrix of lists
variantannotation vcf written 4.5 years ago by Sean Davis21k • updated 4.5 years ago by Michael Lawrence11k
2
votes
1
answer
558
views
1
answer
genotypeToSnpMatrix doesn't handle PL
variantannotation vcf written 4.0 years ago by TimothéeFlutre70 • updated 3.9 years ago by Stephanie M. Gogarten720
5
votes
1
answer
527
views
1
answer
filter "isSnp" for VCF
variantannotation vcf filtervcf written 4.0 years ago by TimothéeFlutre70 • updated 4.0 years ago by Michael Lawrence11k
1
vote
1
answer
505
views
1
answer
Expand annotation on a vcf file
variantannotation vcf written 3.3 years ago by Dee0 • updated 3.3 years ago by Michael Lawrence11k
0
votes
0
answers
483
views
0
answers
Error in matrix
vcf bioconductor written 2.6 years ago by bkauf0
3
votes
1
answer
461
views
1
answer
0
votes
2
answers
451
views
2
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Error converting vcf to gds
snprelate vcf gds written 19 months ago by annat220 • updated 18 months ago by zhengx30
2
votes
1
answer
417
views
1
answer
0
votes
1
answer
311
views
1
answer
PureCN use of VCF QUAL column for filtering when column is dot
vcf purecn qual written 17 months ago by twtoal0 • updated 17 months ago by markus.riester110
3
votes
1
answer
294
views
1
answer
Problem when transforming Platypus vcf to VRanges
variantannotation vcf readvcf vranges written 15 months ago by david.mas0 • updated 15 months ago by Michael Lawrence11k
0
votes
0
answers
279
views
0
answers
vcf to venn diagram
vcf snps venn diagram ggplot2 written 9 months ago by mictadlo0
0
votes
1
answer
222
views
1
answer
comparing 2 long BED files in R in an efficient way
vcf bed written 15 months ago by Bogdan580 • updated 15 months ago by GENOMIC_region0
1
vote
1
answer
142
views
1
answer
0
votes
0
answers
134
views
0
answers
0
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0
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120
views
0
answers
1
vote
3
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119
views
3
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Help creating VRange object
somaticsignatures vcf vrange written 5 months ago by maisapinheiro120 • updated 5 months ago by Julian Gehring1.3k
0
votes
0
answers
63
views
0
answers
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