2
votes
1
answer
83
views
1
answer
2
votes
1
answer
110
views
1
answer
Normalize for changes in one direction
rnaseq limma voom written 8 weeks ago by Jake60 • updated 8 weeks ago by Aaron Lun19k
2
votes
1
answer
123
views
1
answer
Minimum in Voomplot
limma voom written 9 weeks ago by raf420 • updated 9 weeks ago by Ryan C. Thompson6.5k
0
votes
1
answer
203
views
1
answer
voomWithQualityWeights, design and weights
voom rna-seq limma-voom voomwithqualityweights written 10 weeks ago by anne.biton0 • updated 10 weeks ago by Matthew Ritchie730
2
votes
3
answers
154
views
3
answers
voom command broken in limma_3.34.5?
limma voom written 3 months ago by sjk3140 • updated 3 months ago by Gordon Smyth33k
1
vote
1
answer
247
views
1
answer
Limma voom RNA-seq analysis with both categorical and continuous confounders
limma voom written 3 months ago by prathap17080 • updated 3 months ago by Gordon Smyth33k
0
votes
2
answers
188
views
2
answers
Subsetting an EList Object doesn't subset $sample.weights
limma voom elist written 4 months ago by Steve Pederson60 • updated 3 months ago by Gordon Smyth33k
4
votes
1
answer
190
views
1
answer
Improve limma-voom trend fit to noisy data
limma voom written 4 months ago by jma199130 • updated 4 months ago by Aaron Lun19k
0
votes
2
answers
208
views
2
answers
2
votes
1
answer
223
views
1
answer
block design to test two factors with limma
limma voom written 4 months ago by jfertaj20 • updated 4 months ago by Aaron Lun19k
3
votes
2
answers
231
views
2
answers
Paired Test - Design Matrix and Contrast Matrix Voom and Limma
limma voom paired samples written 4 months ago by rfbrhm0 • updated 4 months ago by Gordon Smyth33k
4
votes
2
answers
198
views
2
answers
0
votes
0
answers
177
views
0
answers
10
votes
1
answer
272
views
1
answer
0
votes
1
answer
120
views
1
answer
10
votes
1
answer
1.9k
views
5 follow
1
answer
Bootstrap confidence intervals on RNA-seq expression from Kallisto
rnaseq limma edger deseq2 voom written 2.9 years ago by Sean Davis21k • updated 6 months ago by Paul Harrison60
1
vote
2
answers
202
views
2
answers
Expression profile from $E from Voom
voom $elist written 6 months ago by anpham0 • updated 6 months ago by Steve Lianoglou12k
0
votes
0
answers
326
views
0
answers
limma voom for single factor
limma differential expression voom written 7 months ago by bumbum0 • updated 7 months ago by Gordon Smyth33k
1
vote
1
answer
268
views
1
answer
Limma-voom read count analysis
limma voom differentially methylated cpg's read count written 8 months ago by ioannis.konstantinidis0 • updated 8 months ago by Aaron Lun19k
0
votes
1
answer
542
views
1
answer
0
votes
1
answer
652
views
1
answer
confusion with tximport options and resulting matrix
rnaseq limma voom tximport rsem written 8 months ago by arubio0 • updated 8 months ago by Gordon Smyth33k
2
votes
2
answers
227
views
2
answers
6
votes
1
answer
476
views
1
answer
differential expression analysis of htseq data with edgeR/voom
limma edger voom htseq rnaseq123 written 10 months ago by wd10 • updated 10 months ago by Aaron Lun19k
4
votes
1
answer
358
views
1
answer
Subject: Strange glitch in Voom curve resulting from batch effects
batcheffect limma voom covariate written 11 months ago by raf420 • updated 11 months ago by Gordon Smyth33k
1
vote
1
answer
328
views
1
answer
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