5
votes
1
answer
114
views
1
answer
1
vote
1
answer
121
views
1
answer
1
vote
1
answer
172
views
1
answer
Error message with Voom with blocked design matrix
limma voom blocked design written 5 months ago by raf420 • updated 5 months ago by Gordon Smyth35k
2
votes
1
answer
203
views
1
answer
2
votes
1
answer
177
views
1
answer
Normalize for changes in one direction
rnaseq limma voom written 8 months ago by Jake60 • updated 8 months ago by Aaron Lun21k
2
votes
1
answer
214
views
1
answer
Minimum in Voomplot
limma voom written 8 months ago by raf420 • updated 8 months ago by Ryan C. Thompson6.9k
0
votes
1
answer
357
views
1
answer
voomWithQualityWeights, design and weights
voom rna-seq limma-voom voomwithqualityweights written 8 months ago by anne.biton0 • updated 8 months ago by Matthew Ritchie730
2
votes
3
answers
245
views
3
answers
voom command broken in limma_3.34.5?
limma voom written 9 months ago by sjk3140 • updated 9 months ago by Gordon Smyth35k
2
votes
1
answer
556
views
1
answer
Limma voom RNA-seq analysis with both categorical and continuous confounders
limma voom written 9 months ago by prathap17080 • updated 9 months ago by Gordon Smyth35k
0
votes
2
answers
258
views
2
answers
Subsetting an EList Object doesn't subset $sample.weights
limma voom elist written 10 months ago by Steve Pederson130 • updated 10 months ago by Gordon Smyth35k
4
votes
1
answer
292
views
1
answer
Improve limma-voom trend fit to noisy data
limma voom written 10 months ago by jma199130 • updated 10 months ago by Aaron Lun21k
0
votes
2
answers
307
views
2
answers
2
votes
1
answer
417
views
1
answer
block design to test two factors with limma
limma voom written 10 months ago by jfertaj20 • updated 10 months ago by Aaron Lun21k
3
votes
2
answers
403
views
2
answers
Paired Test - Design Matrix and Contrast Matrix Voom and Limma
limma voom paired samples written 10 months ago by rfbrhm0 • updated 10 months ago by Gordon Smyth35k
4
votes
2
answers
284
views
2
answers
0
votes
0
answers
245
views
0
answers
10
votes
1
answer
401
views
1
answer
0
votes
1
answer
182
views
1
answer
10
votes
1
answer
2.1k
views
5 follow
1
answer
Bootstrap confidence intervals on RNA-seq expression from Kallisto
rnaseq limma edger deseq2 voom written 3.4 years ago by Sean Davis21k • updated 13 months ago by Paul Harrison60
1
vote
2
answers
318
views
2
answers
Expression profile from $E from Voom
voom $elist written 13 months ago by anpham0 • updated 13 months ago by Steve Lianoglou12k
0
votes
0
answers
407
views
0
answers
limma voom for single factor
limma differential expression voom written 13 months ago by bumbum0 • updated 13 months ago by Gordon Smyth35k
1
vote
1
answer
357
views
1
answer
Limma-voom read count analysis
limma voom differentially methylated cpg's read count written 14 months ago by ioannis.konstantinidis0 • updated 14 months ago by Aaron Lun21k
0
votes
1
answer
622
views
1
answer
0
votes
1
answer
775
views
1
answer
confusion with tximport options and resulting matrix
rnaseq limma voom tximport rsem written 15 months ago by arubio0 • updated 15 months ago by Gordon Smyth35k
2
votes
2
answers
333
views
2
answers
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