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Showing :
AAstring
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2
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4
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1.2k
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Ranges on AAStrings
AAString
Views
Biostrings
7.2 years ago
tobias.kockmann
▴ 20
0
votes
4
replies
1.5k
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How to get rid of the AAStrings with a stop codon
aastringset
aastring
updated 7.2 years ago by
Hervé Pagès
16k • written 7.2 years ago by
XIA.PAN
▴ 20
0
votes
1
reply
1.0k
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creating PDIct from AAStringSets
PDict
Biostrings
aastring
updated 7.2 years ago by
Hervé Pagès
16k • written 7.2 years ago by
Assa Yeroslaviz
★ 1.5k
2
votes
1
reply
1.1k
views
Comparing AAStrings using identical() instead of ==
AAstring
Biostrings
==
identical
updated 9.4 years ago by
Hervé Pagès
16k • written 9.4 years ago by
jdavison
▴ 10
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Comment: Reproducibility issue with scran together with lapply and BiocParallel
by
ATpoint
★ 4.0k
Thanks Aaron for the response. RNGseed (for me) has no effect. I actually stumbled over this in one of my analysis where I have a constant …
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! 1)"Your contrast is comparing LGR5 to Homeostasis." means (Lgr5)/(Homeostasis). Is it right? Then, I think if…
Answer: Reproducibility issue with scran together with lapply and BiocParallel
by
Aaron Lun
★ 28k
IIRC **BiocParallel** switches to a different RNG when inside its own functions like `bplapply` - specifically L'Ecuyer-CMRG, as opposed to…
Comment: DESeq2 output used for PCA plot on R studio
by
swbarnes2
★ 1.3k
This looks terrible for RNASeq data, because it's not RNASeq data. It's a matrix of pretty random numbers, which you know because you poste…
Comment: DESeq2 output used for PCA plot on R studio
by
Aaliya
• 0
I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…
Votes
C: null model and DEXSeqDataSet object in DEXSEQ
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Answer: Interpret plot from DiffBind
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