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Merge 2 accounts, or delete 1 account.
Bioconductor
ALL
11 months ago • updated 10 months ago
simone.tiberi
• 0
0
votes
1
reply
482
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Categorical or continuous covariates
ALL
The
DifferentialRegulation
PathNet
updated 14 months ago by
heritageericsson
• 0 • written 14 months ago by
Mine
• 0
0
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1
reply
1.7k
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Bioconductor will not install on Rstudio
ALL
updated 21 months ago by
James W. MacDonald
65k • written 21 months ago by
xxxsarahkimxxx
• 0
1
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3
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2.0k
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update all/some/none how to set default to "update all"
biocLite
update
all
default
ask
updated 5.2 years ago by
Fischer-philipp
▴ 30 • written 5.2 years ago by
rgiannico
▴ 10
2
votes
2
replies
1.4k
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Building linear model (age effect on gene expression)
bioconductor
ALL
linear model
updated 5.7 years ago by
Gordon Smyth
50k • written 5.7 years ago by
detroit.drive
• 0
0
votes
3
replies
1.4k
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Job:
Tutor Wanted: help with R statistical analysis (must be familiar with Bioconductor)
bioconductor
ALL
R
Job
5.7 years ago
detroit.drive
• 0
4
votes
8
replies
2.3k
views
ALL dataset, correct syntax using the exprs call?
ALL
bioconductor
biobase
exprs
updated 5.7 years ago by
Martin Morgan
25k • written 5.7 years ago by
detroit.drive
• 0
0
votes
1
reply
1.3k
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"ALL" package under biocLite
R
ALL
updated 7.4 years ago by
Marcel Ramos
690 • written 7.4 years ago by
mdfislam89
• 0
2
votes
1
reply
2.7k
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Installation of bioConductor packages
installation
packages
bioconductor
all
updated 8.4 years ago by
Martin Morgan
25k • written 8.4 years ago by
av
• 0
9 results • Page
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Comment: Reproducibility issue with scran together with lapply and BiocParallel
by
ATpoint
★ 4.0k
Thanks Aaron for the response. RNGseed (for me) has no effect. I actually stumbled over this in one of my analysis where I have a constant …
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! 1)"Your contrast is comparing LGR5 to Homeostasis." means (Lgr5)/(Homeostasis). Is it right? Then, I think if…
Answer: Reproducibility issue with scran together with lapply and BiocParallel
by
Aaron Lun
★ 28k
IIRC **BiocParallel** switches to a different RNG when inside its own functions like `bplapply` - specifically L'Ecuyer-CMRG, as opposed to…
Comment: DESeq2 output used for PCA plot on R studio
by
swbarnes2
★ 1.3k
This looks terrible for RNASeq data, because it's not RNASeq data. It's a matrix of pretty random numbers, which you know because you poste…
Comment: DESeq2 output used for PCA plot on R studio
by
Aaliya
• 0
I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…
Votes
C: null model and DEXSeqDataSet object in DEXSEQ
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
Answer: Interpret plot from DiffBind
Answer: How to retrieve gene ontology GO class from gene list?
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