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ASpli
•
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0
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0
replies
171
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Error in set(x, j = name, value = value) : Supplied 52 items to be assigned to 55 items of column 'locus'. If you wish to 'recycle' the RHS please…
ASpli
28 days ago
vipul14
• 0
5
votes
6
replies
780
views
ASpli checks fail on Linux due to missing dependency to statmod
ASpli
updated 7 months ago by
Gordon Smyth
50k • written 8 months ago by
martin.grigorov
▴ 10
0
votes
1
reply
608
views
Splicing analysis with ASpli package gives an error when I use binGenome function.
S4Vectors
Aspli
updated 13 months ago by
Sophie
• 0 • written 14 months ago by
salvocomplicazioni1
• 0
0
votes
3
replies
3.1k
views
ASpli: Error in h(simpleError(msg, call)) : error in evaluating the argument 'x' in selecting a method for function 'sort': 'start' or 'end' canno…
ASpli
updated 6 months ago by
andresrabinovich
• 0 • written 17 months ago by
thithusuong.nguyen
• 0
0
votes
0
replies
581
views
ASpli package gives an error in jCounts function and suggest a parameter change in granges()
ASpli
alterna
AlternativeSplicing
2.1 years ago
hamza_karakurt
▴ 50
0
votes
1
reply
1.5k
views
ASpli: Error in h(simpleError(msg, call))
ASpli
updated 20 months ago by
lincango_marco
• 0 • written 2.6 years ago by
Dmitri
• 0
6
votes
10
replies
1.7k
views
ASpli: jCounts() Error in av[at] <- a[at] : NAs are not allowed in subscripted assignments
ASpli
updated 2.6 years ago by
Ines
• 0 • written 2.9 years ago by
Emma
▴ 20
1
vote
3
replies
975
views
ASpli error message
ASpli
updated 2.1 years ago by
hamza_karakurt
▴ 50 • written 2.9 years ago by
stephen66
▴ 50
1
vote
11
replies
1.9k
views
Aspli: error with gbCounts
Aspli
ASpli
3.0 years ago • updated 2.9 years ago
jbono
▴ 10
0
votes
1
reply
558
views
function plotgenomicregions does not appear in the aspli package installed in windows
software error
aspli
plotgenomicregions
windows
3.9 years ago
joanmarquez21
• 0
0
votes
1
reply
762
views
ASpli package function plotGenomicRegions fails in windows
ASpli
plotGenomicRegions
updated 3.6 years ago by
emancini
▴ 50 • written 4.7 years ago by
mgdrnl
• 0
3
votes
2
replies
1.0k
views
ASpli readCounts never ends!
aspli
readCounts
rna-seq
alternative splicing
AS
5.1 years ago
fernandalpcosta
▴ 10
0
votes
0
replies
861
views
ASpli AsDiscover error
R
alternative splicing
ASpli
AsDiscover
5.3 years ago
abdul rawoof
▴ 60
0
votes
0
replies
901
views
ASpli Package: Problem with readCounts() function, no Junctions analysed.
rnaseq
alternative splicing
ASpli
5.3 years ago
nicolas.guyon2
• 0
0
votes
0
replies
794
views
ASPLI (RNAseq AS) R package error
rnaseq
ASPLI
5.7 years ago
dina.hesham139
• 0
0
votes
0
replies
1.0k
views
Running ASpli on R results in "Error: vector memory exhausted (limit reached?)"
aspli
rstudio
5.8 years ago
arphatak
• 0
0
votes
1
reply
864
views
Splicing analysis with ASpli
ASpli
updated 6.0 years ago by
Dario Strbenac
★ 1.5k • written 6.1 years ago by
jovel_juan
▴ 30
2
votes
2
replies
1.3k
views
ASpli ERROR during the counting step
ASpli
rnaseq
updated 6.1 years ago by
hojka.anna
▴ 10 • written 6.3 years ago by
daniele.ottaviani
▴ 10
18 results • Page
1 of 1
Recent ...
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Answer: Doing comparison of RNA-seq data using EdgeR
by
Gordon Smyth
50k
It's pretty easy to do a two-group comparison using edgeR, but you seem to be stuck at the initial stage of reading data into R. If you exp…
Answer: Differing results from plotMDS and PCAtools
by
Gordon Smyth
50k
The reason why the two plots are different is that the first plot is a PCA plot while the second is a biplot. Quite different plots. The P…
Answer: New genes that did not exist in dds object suddenly showed up after degPatterns
by
Michael Love
41k
May be documented by the software you are using? https://github.com/lpantano/DEGreport
Answer: Doing comparison of RNA-seq data using Deseq2
by
Michael Love
41k
Take a look at our workflow, this starts from a beginner's level. You could export from Excel using CSV or TSV, then read into R. htt…
Answer: WGCNA: analysis of complex trait associations with regressions
by
James W. MacDonald
65k
This support site is meant to help people with questions about Bioconductor packages (WGCNA is not a Bioconductor package). You might try o…
Votes
transcript name mapping between human and mouse
transcript name mapping between human and mouse
A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
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