Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
ATACSeq
•
reset
0
votes
0
replies
20
views
DIFFBIND : beginner questions, sex, multiple phenotypes, etc...
DiffBind
ATACSeq
9 hours ago
Pierre Lindenbaum
▴ 10
0
votes
1
reply
241
views
Extracting binding matrix with raw counts from DiffBind in ATAC-seq data not working
DiffBind
ATACSeq
9 weeks ago
isaromero8888
• 0
0
votes
0
replies
165
views
Which normalization should I do use for ATAC Seq using DiffBind
DiffBind
edgeR
ATACSeq
DESeq2
9 weeks ago
Jawahar
• 0
0
votes
0
replies
203
views
ATACseq- Counts around TSS plot
DiffBind
ATACSeq
3 months ago
inna.gur
• 0
0
votes
7
replies
574
views
ATACseqQC shiftGAlignmentsList() problem
ATACseqQC
ATACSeq
updated 27 days ago by
danalvoronov
▴ 10 • written 4 months ago by
jfmay
• 0
0
votes
0
replies
342
views
DiffBind dba.count() crash/can't finish problems
dba.count
DiffBind
ATACSeq
updated 5 months ago by
James W. MacDonald
65k • written 5 months ago by
sophie.hfliu
• 0
0
votes
2
replies
741
views
DiffBind dropping peaks in ATAC-seq data
DiffBind
ATACSeq
updated 8 months ago by
Malcolm Cook
★ 1.6k • written 8 months ago by
Nebat
• 0
4
votes
6
replies
860
views
Positive and negative value fold value in ATAC seq using DiffBind
DiffBind
ATACSeq
11 months ago
Chris
• 0
5
votes
8
replies
932
views
Help with error install csaw
ChIPSeq
ATACSeq
updated 11 months ago by
nekisaf309
• 0 • written 12 months ago by
Chris
• 0
3
votes
5
replies
795
views
How to annotate genes from results of DiffBind
ATACSeq
updated 11 months ago by
James W. MacDonald
65k • written 12 months ago by
Chris
• 0
8
votes
13
replies
2.6k
views
Help with Error in DiffBind
DiffBind
ATACSeq
12 months ago
Chris
• 0
0
votes
2
replies
1.1k
views
long computing time for TSS enrichment score
ATACSeq
updated 7 months ago by
Noah
• 0 • written 19 months ago by
Taeim
• 0
1
vote
3
replies
1.5k
views
regionCounts() from csaw - object 'fancy_mseq' not found
ATACSeq
regionCounts
csaw
updated 3 months ago by
dineika.chandrananda
• 0 • written 23 months ago by
zgraytho88
• 0
13 results • Page
1 of 1
Recent ...
Replies
Answer: WGCNA: analysis of complex trait associations with regressions
by
James W. MacDonald
65k
This support site is meant to help people with questions about Bioconductor packages (WGCNA is not a Bioconductor package). You might try o…
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Answer: Microarray Limma Model fitting and DEG
by
Gordon Smyth
50k
This dataset seems straightforward to analyse using the original MAS expression values on GEO. MAS expression values are known to be noisy …
Answer: Trimming a section of a scaffold from a genome
by
James W. MacDonald
65k
It's undoubtedly possible, but you don't provide enough information to go on. If I assume you are talking about an existing `BSgenome` pack…
Votes
A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
DESeq2 normalization vs VST vs rlog
Answer: DESeq2 "Contrast" option
Awards
• All
Popular Question
to
michael.s
• 0
Popular Question
to
James W. MacDonald
65k
Popular Question
to
Pierre Lindenbaum
▴ 10
Popular Question
to
Gordon Smyth
50k
Popular Question
to
Jenny Drnevich
★ 2.0k
Locations
• All
United States,
just now
Austria,
15 minutes ago
Boston University,
16 minutes ago
United States,
24 minutes ago
United States,
26 minutes ago
Traffic: 748 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6