Bioconductor ATACSeq

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ATACSeq regionCounts csaw

updated 4 months ago by dineika.chandrananda • 0 • written 24 months ago by zgraytho88 • 0

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626

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ATACseqQC ATACSeq

updated 7 weeks ago by danalvoronov ▴ 10 • written 4 months ago by jfmay • 0

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227

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DiffBind edgeR ATACSeq DESeq2

3 months ago Jawahar • 0

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791

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DiffBind ATACSeq

updated 9 months ago by Malcolm Cook ★ 1.6k • written 9 months ago by Nebat • 0

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385

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dba.count DiffBind ATACSeq

updated 6 months ago by James W. MacDonald 65k • written 6 months ago by sophie.hfliu • 0

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285

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DiffBind ATACSeq

12 weeks ago isaromero8888 • 0

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1.2k

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ATACSeq

updated 8 months ago by Noah • 0 • written 20 months ago by Taeim • 0

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DiffBind ATACSeq

25 days ago Pierre Lindenbaum ▴ 10

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177

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DiffBind DESeq2 ATACSeq

5 days ago • updated 3 days ago lonn • 0

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239

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DiffBind ATACSeq

3 months ago inna.gur • 0

10 results • Page 1 of 1

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Comment: DESeq2 - dispersion estimation when there is none by WardDeb • 0

Thank you for the pointers, I'll revert back again to the method section of the paper. As for the negative relationship of the estimated di…

Comment: Error for AnnotationForge makeOrgPackageFromNCBI function by Gayatri • 0

Hello James, How to generate the db? By running the makeOrgPackageFromNCBI() command? I have tried doing that, first by just deleting the …

Answer: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param by Tim Peters ▴ 170

Hi Jose and Russ, Apologies to Jose for not seeing this earlier. Sometimes the loess smoother in the bottom panel will throw this error …

Comment: Trying to use enrichGO by fernanda.backsouza • 0

Sure, I changed it but still NULL G0 <- enrichGO( gene = ortologos_filtrados$Gene.ID, OrgDb = org.Cs.eg.db, keyType = "ENTREZID",…

Answer: limma-voom: Calculate the log-fold change in gene expression within a sample by Gordon Smyth 50k

No, you cannot use residuals to compute logFCs. From the information you give, I guess that you need to add individual-specific condition …

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Answer: DESeq2 - dispersion estimation when there is none

Comment: Cannabis and KEGGgraph

Answer: Cannabis and KEGGgraph

Answer: Differentially expressed genes in monocle pseudotime

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Scholar to Gordon Smyth 50k