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Comment: Failed to install Biobase
by
johann.brisseau
•
0
Hi James
When i launched the link via browser, i had message from Zcaller which bloked the access
here below the message
Access to this we…
Comment: how can I do gene differential analysis on data after vst
by
linouhao
▴
20
GSE156237_DESeq2_vsd_exp.txt.gz
I have a gene expression matrix, the data in it was transformed by vst, how can I do differential analysis…
Comment: how can I do gene differential analysis on data after vst
by
ATpoint
★
2.4k
I do not understand what you mean. Please search previous posts. vst can be used with limma, and DESeq2 needs raw counts as described in th…
Comment: how can I do gene differential analysis on data after vst
by
linouhao
▴
20
hi thanks a lot. It is a matrix, not much related to GEO, more related to DESEQ2, I want to know if raw count after VST function , then c…
Answer: how can I do gene differential analysis on data after vst
by
ATpoint
★
2.4k
I am not sure who you are addressing here, the support forum is not associated with GEO. In general if you need raw counts either download …
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