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Annotatr
•
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0
votes
1
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203
views
Problem with annotations using annotatr
annotatr
6 months ago
eric.rhoncalderon
• 0
0
votes
0
replies
271
views
Is it possible to output ensembl id for annotatr build_annotations basicgenes?
Annotation
annotatr
13 months ago
Ahdee
▴ 50
0
votes
0
replies
408
views
annotatr with custom TxDb
GenomicFeatures
annotatr
genomicFe
21 months ago
António Miguel de Jesus Domingues
▴ 490
0
votes
0
replies
485
views
sampling random regions of same nucleotide composition from hg38 genome
annotatr
regioneR
gkmSVM
2.1 years ago
rohitsatyam102
▴ 20
0
votes
0
replies
381
views
annotatr package: GRanges object contains out-of-bound ranges
annotatr
GenomicRanges
2.3 years ago
Nala
• 0
3
votes
4
replies
823
views
Can't install packages on R or via Bioconductor
R
installation
packages
annotatr
biocmanager
2.8 years ago
dakarai_esgdaille
▴ 10
1
vote
1
reply
963
views
annotatr: CpG Island/Shore/Shelf IDs
annotatr
updated 4.2 years ago by
rcavalca
▴ 140 • written 4.2 years ago by
sorjuelal
• 0
0
votes
3
replies
751
views
CpG site not annotated with annotatr
annotatr
cpg
updated 4.3 years ago by
rcavalca
▴ 140 • written 4.3 years ago by
soli5
• 0
0
votes
1
reply
654
views
ENSEMBL database for annotatr
annotatr
updated 4.9 years ago by
rcavalca
▴ 140 • written 4.9 years ago by
xie186
• 0
2
votes
2
replies
751
views
Unexpected results from annotatr
annotatr
updated 5.0 years ago by
rcavalca
▴ 140 • written 5.0 years ago by
xie186
• 0
2
votes
2
replies
629
views
'fill_order' in annotatr
annotatr
updated 5.0 years ago by
rcavalca
▴ 140 • written 5.0 years ago by
xie186
• 0
1
vote
3
replies
848
views
How can I use Annotatr on CDS?
Annotatr
CDS
Exon
UTR
updated 5.0 years ago by
rcavalca
▴ 140 • written 5.0 years ago by
xie186
• 0
0
votes
3
replies
828
views
find intersections of genomic regions with built-in genomic annotations for S.Cerevisiae
annotatr
6.0 years ago
vivianengoune
• 0
0
votes
2
replies
1.2k
views
annotatr GRanges Error
annotatr
updated 6.0 years ago by
rcavalca
▴ 140 • written 6.0 years ago by
cguzman.roma
• 0
4
votes
2
replies
841
views
Annotatr package not loading certain features
annotatr
updated 6.2 years ago by
Valerie Obenchain
★ 6.7k • written 6.2 years ago by
divyswar01
• 0
15 results • Page
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Replies
Comment: Not able to download recount3 data
by
Niveditha
▴ 10
Not sure if this is a issue for which I need to create a ticket in the github link provided in the previous comment. Request you to confirm
Comment: Not able to download recount3 data
by
Niveditha
▴ 10
CURL command - curl https://www.sciserver.org/public-data/recount3/data/human/homes_index CURL command Works in the system with the follow…
Comment: Mutect version, matched normal and manual curation in PureCN
by
Ken C
• 0
Hi Markus, Thanks for your previous help. I now have a particular question that I believe is related to manual curation of PureCN results,…
Comment: TPP2D - multicore computing for bootstrapNullAlternativeModel(...)
by
Tobias
▴ 40
I found a way that worked on my MacBook Pro and also on a Linux (Debian 10): ``` ##### multicore version ##### library(BiocParallel) null_…
Answer: TPP2D - multicore computing for bootstrapNullAlternativeModel(...)
by
James W. MacDonald
62k
You are already halfway to figuring this out for yourself. Here's how I would proceed. The argument 'BPPARAM' says something about 'opti…
Votes
C: SGSeq: moving toward diffex from SGSeq analysis
C: SGSeq: moving toward diffex from SGSeq analysis
A: SGSeq: moving toward diffex from SGSeq analysis
A: SGSeq: moving toward diffex from SGSeq analysis
SGSeq: moving toward diffex from SGSeq analysis
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