Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
Annotatr
•
reset
3
votes
4
replies
1.5k
views
Can't install packages on R or via Bioconductor
R
installation
packages
annotatr
biocmanager
4.0 years ago
dakarai_esgdaille
▴ 10
0
votes
3
replies
1.1k
views
find intersections of genomic regions with built-in genomic annotations for S.Cerevisiae
annotatr
7.2 years ago
vivianengoune
• 0
1
vote
3
replies
1.4k
views
How can I use Annotatr on CDS?
Annotatr
CDS
Exon
UTR
updated 6.2 years ago by
rcavalca
▴ 140 • written 6.2 years ago by
xie186
• 0
0
votes
3
replies
1.3k
views
CpG site not annotated with annotatr
annotatr
cpg
updated 5.5 years ago by
rcavalca
▴ 140 • written 5.5 years ago by
soli5
• 0
4
votes
2
replies
1.1k
views
Annotatr package not loading certain features
annotatr
updated 7.4 years ago by
Valerie Obenchain
★ 6.8k • written 7.4 years ago by
divyswar01
• 0
0
votes
2
replies
1.6k
views
annotatr GRanges Error
annotatr
updated 7.2 years ago by
rcavalca
▴ 140 • written 7.2 years ago by
cguzman.roma
• 0
2
votes
2
replies
959
views
'fill_order' in annotatr
annotatr
updated 6.2 years ago by
rcavalca
▴ 140 • written 6.2 years ago by
xie186
• 0
2
votes
2
replies
1.1k
views
Unexpected results from annotatr
annotatr
updated 6.2 years ago by
rcavalca
▴ 140 • written 6.2 years ago by
xie186
• 0
0
votes
1
reply
1.0k
views
sampling random regions of same nucleotide composition from hg38 genome
annotatr
regioneR
gkmSVM
updated 5 months ago by
Mahmoud
• 0 • written 3.3 years ago by
rohitsatyam102
▴ 20
0
votes
1
reply
817
views
Problem with annotations using annotatr
annotatr
20 months ago
eric.rhoncalderon
• 0
0
votes
1
reply
508
views
custom annotations with annotatr
annotatr
11 months ago
luca.s
▴ 50
0
votes
1
reply
923
views
ENSEMBL database for annotatr
annotatr
updated 6.1 years ago by
rcavalca
▴ 140 • written 6.2 years ago by
xie186
• 0
1
vote
1
reply
1.4k
views
annotatr: CpG Island/Shore/Shelf IDs
annotatr
updated 5.4 years ago by
rcavalca
▴ 140 • written 5.4 years ago by
sorjuelal
• 0
0
votes
0
replies
145
views
Annotatr Duplicate Entries
annotatr
AnnotationHub
11 weeks ago
hayleyw
• 0
0
votes
0
replies
812
views
annotatr package: GRanges object contains out-of-bound ranges
annotatr
GenomicRanges
3.5 years ago
Nala
• 0
0
votes
0
replies
788
views
annotatr with custom TxDb
GenomicFeatures
annotatr
genomicFe
3.0 years ago
António Miguel de Jesus Domingues
▴ 490
0
votes
0
replies
134
views
annotatr rn7?
annotatr
3 months ago
chuanjiao6
• 0
0
votes
0
replies
687
views
Is it possible to output ensembl id for annotatr build_annotations basicgenes?
Annotation
annotatr
2.3 years ago
Ahdee
▴ 50
18 results • Page
1 of 1
Recent ...
Replies
Comment: FilterByExpr low counts with small sample size
by
Gordon Smyth
50k
As always, it helps to see code. Are you running `voom` or `voomLmFit`? Did you run `normLibSizes()` in edgeR prior to `voom`? Are you star…
Comment: Batch correction and repeated measures
by
Gordon Smyth
50k
In your code, it was clear that `expr.mat` was a matrix rather than a DGEList, so it has to be a count matrix. If you have a DGEList object…
Comment: Methylation Analysis experiment design using Limma
by
Gordon Smyth
50k
I don't analyse methylation arrays so cannot advise on specific limma settings for that type of data. Please follow the advice of the methy…
Comment: Light difference when using coef vs omit a group when compare 3 groups.
by
Chris
• 0
Hi Gordon, thank you so much for further guidance! I discussed this issue with psychology doctor who treat Alzheimer patients and they don'…
Comment: Single-Cell Data Simulation from Bulk RNA-seq
by
wichaidi
• 0
Hi - I am wondering what you decided to do. I am currently in a similar condition where I need to create a toy scRNAseq data from bulk.
Votes
Answer: How many of my genes from my gene list are in each KEGG pathway?
Comment: Light difference when using coef vs omit a group when compare 3 groups.
DESeq2 variance transformation error and plot dispersion Estimate
A: DESeq2 variance transformation error and plot dispersion Estimate
ensembl to hgnc symbols creates duplicates
Awards
• All
Popular Question
to
paria.alipour
• 0
Popular Question
to
Eman
• 0
Popular Question
to
James W. MacDonald
65k
Scholar
to
nhaus
▴ 30
Popular Question
to
shepherl
3.8k
Locations
• All
France,
21 minutes ago
Israel,
24 minutes ago
WEHI, Melbourne, Australia,
43 minutes ago
The city by the bay,
54 minutes ago
Macao,
55 minutes ago
Traffic: 476 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6