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Annotatr
•
reset
0
votes
0
replies
153
views
Annotatr Duplicate Entries
annotatr
AnnotationHub
12 weeks ago
hayleyw
• 0
0
votes
0
replies
141
views
annotatr rn7?
annotatr
3 months ago
chuanjiao6
• 0
0
votes
1
reply
1.1k
views
sampling random regions of same nucleotide composition from hg38 genome
annotatr
regioneR
gkmSVM
updated 5 months ago by
Mahmoud
• 0 • written 3.3 years ago by
rohitsatyam102
▴ 20
0
votes
1
reply
515
views
custom annotations with annotatr
annotatr
11 months ago
luca.s
▴ 50
0
votes
1
reply
824
views
Problem with annotations using annotatr
annotatr
20 months ago
eric.rhoncalderon
• 0
0
votes
0
replies
694
views
Is it possible to output ensembl id for annotatr build_annotations basicgenes?
Annotation
annotatr
2.4 years ago
Ahdee
▴ 50
0
votes
0
replies
794
views
annotatr with custom TxDb
GenomicFeatures
annotatr
genomicFe
3.0 years ago
António Miguel de Jesus Domingues
▴ 490
0
votes
0
replies
819
views
annotatr package: GRanges object contains out-of-bound ranges
annotatr
GenomicRanges
3.5 years ago
Nala
• 0
3
votes
4
replies
1.5k
views
Can't install packages on R or via Bioconductor
R
installation
packages
annotatr
biocmanager
4.1 years ago
dakarai_esgdaille
▴ 10
1
vote
1
reply
1.4k
views
annotatr: CpG Island/Shore/Shelf IDs
annotatr
updated 5.4 years ago by
rcavalca
▴ 140 • written 5.4 years ago by
sorjuelal
• 0
0
votes
3
replies
1.3k
views
CpG site not annotated with annotatr
annotatr
cpg
updated 5.5 years ago by
rcavalca
▴ 140 • written 5.5 years ago by
soli5
• 0
0
votes
1
reply
924
views
ENSEMBL database for annotatr
annotatr
updated 6.2 years ago by
rcavalca
▴ 140 • written 6.2 years ago by
xie186
• 0
2
votes
2
replies
1.1k
views
Unexpected results from annotatr
annotatr
updated 6.2 years ago by
rcavalca
▴ 140 • written 6.2 years ago by
xie186
• 0
2
votes
2
replies
964
views
'fill_order' in annotatr
annotatr
updated 6.2 years ago by
rcavalca
▴ 140 • written 6.2 years ago by
xie186
• 0
1
vote
3
replies
1.4k
views
How can I use Annotatr on CDS?
Annotatr
CDS
Exon
UTR
updated 6.2 years ago by
rcavalca
▴ 140 • written 6.2 years ago by
xie186
• 0
0
votes
3
replies
1.1k
views
find intersections of genomic regions with built-in genomic annotations for S.Cerevisiae
annotatr
7.2 years ago
vivianengoune
• 0
0
votes
2
replies
1.6k
views
annotatr GRanges Error
annotatr
updated 7.2 years ago by
rcavalca
▴ 140 • written 7.2 years ago by
cguzman.roma
• 0
4
votes
2
replies
1.1k
views
Annotatr package not loading certain features
annotatr
updated 7.4 years ago by
Valerie Obenchain
★ 6.8k • written 7.4 years ago by
divyswar01
• 0
18 results • Page
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Replies
Comment: DESeq2 output used for PCA plot on R studio
by
Aaliya
• 0
How am i making the data? I am using the DESeq2 output data which I had generated
Answer: Use of negative binomial model for exponential decay rate estimation using DESeq
by
Michael Love
41k
Sounds reasonable. For ranking genes, you could choose those with low decay rate but removing thoses where it is indistinguishable from …
Answer: Citation for edgeR user guide
by
Gordon Smyth
50k
Thanks for thinking about how to cite edgeR. Citations are indeed the main way by which the edgeR authors get credit for their work. The Us…
Comment: DESeq2 output used for PCA plot on R studio
by
swbarnes2
★ 1.3k
You are just making up data? What is the point of this exercise?
Comment: How to retrieve gene ontology GO class?
by
James W. MacDonald
65k
What do you mean by 'the information'? Do you have things in particular that you want?
Votes
Answer: Citation for edgeR user guide
Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)
Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.
Answer: minfi::read.metharray.exp
Comment: Trying to use enrichGO
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