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Aspli
•
reset
1
vote
11
replies
1.9k
views
Aspli: error with gbCounts
Aspli
ASpli
3.0 years ago • updated 2.9 years ago
jbono
▴ 10
6
votes
10
replies
1.7k
views
ASpli: jCounts() Error in av[at] <- a[at] : NAs are not allowed in subscripted assignments
ASpli
updated 2.6 years ago by
Ines
• 0 • written 2.9 years ago by
Emma
▴ 20
5
votes
6
replies
778
views
ASpli checks fail on Linux due to missing dependency to statmod
ASpli
updated 7 months ago by
Gordon Smyth
50k • written 8 months ago by
martin.grigorov
▴ 10
1
vote
3
replies
973
views
ASpli error message
ASpli
updated 2.1 years ago by
hamza_karakurt
▴ 50 • written 2.9 years ago by
stephen66
▴ 50
0
votes
3
replies
3.1k
views
ASpli: Error in h(simpleError(msg, call)) : error in evaluating the argument 'x' in selecting a method for function 'sort': 'start' or 'end' canno…
ASpli
updated 6 months ago by
andresrabinovich
• 0 • written 17 months ago by
thithusuong.nguyen
• 0
2
votes
2
replies
1.3k
views
ASpli ERROR during the counting step
ASpli
rnaseq
updated 6.1 years ago by
hojka.anna
▴ 10 • written 6.3 years ago by
daniele.ottaviani
▴ 10
3
votes
2
replies
1.0k
views
ASpli readCounts never ends!
aspli
readCounts
rna-seq
alternative splicing
AS
5.1 years ago
fernandalpcosta
▴ 10
0
votes
1
reply
761
views
ASpli package function plotGenomicRegions fails in windows
ASpli
plotGenomicRegions
updated 3.6 years ago by
emancini
▴ 50 • written 4.7 years ago by
mgdrnl
• 0
0
votes
1
reply
557
views
function plotgenomicregions does not appear in the aspli package installed in windows
software error
aspli
plotgenomicregions
windows
3.9 years ago
joanmarquez21
• 0
0
votes
1
reply
1.5k
views
ASpli: Error in h(simpleError(msg, call))
ASpli
updated 20 months ago by
lincango_marco
• 0 • written 2.6 years ago by
Dmitri
• 0
0
votes
1
reply
605
views
Splicing analysis with ASpli package gives an error when I use binGenome function.
S4Vectors
Aspli
updated 13 months ago by
Sophie
• 0 • written 14 months ago by
salvocomplicazioni1
• 0
0
votes
1
reply
861
views
Splicing analysis with ASpli
ASpli
updated 6.0 years ago by
Dario Strbenac
★ 1.5k • written 6.1 years ago by
jovel_juan
▴ 30
0
votes
0
replies
580
views
ASpli package gives an error in jCounts function and suggest a parameter change in granges()
ASpli
alterna
AlternativeSplicing
2.1 years ago
hamza_karakurt
▴ 50
0
votes
0
replies
793
views
ASPLI (RNAseq AS) R package error
rnaseq
ASPLI
5.7 years ago
dina.hesham139
• 0
0
votes
0
replies
170
views
Error in set(x, j = name, value = value) : Supplied 52 items to be assigned to 55 items of column 'locus'. If you wish to 'recycle' the RHS please…
ASpli
27 days ago
vipul14
• 0
0
votes
0
replies
858
views
ASpli AsDiscover error
R
alternative splicing
ASpli
AsDiscover
5.3 years ago • updated 5.2 years ago
abdul rawoof
▴ 60
0
votes
0
replies
898
views
ASpli Package: Problem with readCounts() function, no Junctions analysed.
rnaseq
alternative splicing
ASpli
5.3 years ago
nicolas.guyon2
• 0
0
votes
0
replies
999
views
Running ASpli on R results in "Error: vector memory exhausted (limit reached?)"
aspli
rstudio
5.8 years ago
arphatak
• 0
18 results • Page
1 of 1
Recent ...
Replies
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 10
Yes that is correct
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
by
Gordon Smyth
50k
It is the minimum group size rather than the total number of samples that is relevant. `min.prop` is more a biological parameter rather th…
Answer: Microarray Limma Model fitting and DEG
by
Gordon Smyth
50k
This dataset seems straightforward to analyse using the original MAS expression values on GEO. MAS expression values are known to be noisy …
Answer: Trimming a section of a scaffold from a genome
by
James W. MacDonald
65k
It's undoubtedly possible, but you don't provide enough information to go on. If I assume you are talking about an existing `BSgenome` pack…
Comment: DEG Filtering
by
Gordon Smyth
50k
I already know that you using CEL files because you need them to perform RMA normalization. Yes, you should follow the advice I have alread…
Votes
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
DESeq2 normalization vs VST vs rlog
Answer: DESeq2 "Contrast" option
Answer: error in ChAMP loading file
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