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News:
Nominations for Bioconductor Awards 2024!
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Bioconductor
Bioc204
26 days ago
shepherl
3.8k
1
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240
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News:
Nominations for Bioconductor Awards 2024!
Recognition
Awards
Bioconductor
Bioc2024
8 weeks ago • updated 6 weeks ago
shepherl
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338
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News:
May 31st is the last day to nominate for Bioc2023 Awards!
Bioconductor
Awards
Bioc2023
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10 months ago
shepherl
3.8k
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Last Week to Nominate for Bioc2023 Awards!
Bioconductor
Bioc2023
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11 months ago
shepherl
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Junior Developer or New Package Developer Award
Bioconductor
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Bioc2023
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11 months ago
shepherl
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Bioconductor Long-term Contribution Award
Bioc2023
Bioconductor
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11 months ago
shepherl
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518
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Bioconductor Community Engagement, Outreach, and Diversity Award
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Bioconductor
Bioc2023
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11 months ago
shepherl
3.8k
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486
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News:
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Bioc2023
Recognition
12 months ago • updated 11 months ago
shepherl
3.8k
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566
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Bioc2022
Bioconductor
23 months ago
shepherl
3.8k
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Bioconductor Scientific or Informatic Technology Advancement Award!
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Bioc2022
Bioconductor
written 23 months ago by
shepherl
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Bioconductor Long-term Contribution Award
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Bioconductor
24 months ago
shepherl
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Bioconductor
2.0 years ago
shepherl
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Bioconductor Community Engagement, Outreach, and Diversity Award
Bioc2022
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Bioconductor
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2.0 years ago
shepherl
3.8k
0
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642
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News:
Bioconductor Award for Outstanding Documentation
Bioc2022
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Bioconductor
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2.0 years ago
shepherl
3.8k
1
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1.0k
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Bioc2022
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shepherl
3.8k
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Bioc2021
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2.9 years ago
shepherl
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711
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Long-term Bioconductor Contribution Award
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Bioc2021
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2.9 years ago
shepherl
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2.9 years ago
shepherl
3.8k
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729
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Bioc2021
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Bioconductor
2.9 years ago
shepherl
3.8k
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799
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3.0 years ago
shepherl
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871
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3.0 years ago
shepherl
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Bioc2021
3.0 years ago
shepherl
3.8k
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3.8 years ago
shepherl
3.8k
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shepherl
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shepherl
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3.9 years ago
shepherl
3.8k
4
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Bioc2020
Bioconductor
Awards
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4.0 years ago • updated 3.9 years ago
shepherl
3.8k
27 results • Page
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Comment: FilterByExpr low counts with small sample size
by
Gordon Smyth
50k
As always, it helps to see code. Are you running `voom` or `voomLmFit`? Did you run `normLibSizes()` in edgeR prior to `voom`? Are you star…
Comment: Batch correction and repeated measures
by
Gordon Smyth
50k
In your code, it was clear that `expr.mat` was a matrix rather than a DGEList, so it has to be a count matrix. If you have a DGEList object…
Comment: Methylation Analysis experiment design using Limma
by
Gordon Smyth
50k
I don't analyse methylation arrays so cannot advise on specific limma settings for that type of data. Please follow the advice of the methy…
Comment: Light difference when using coef vs omit a group when compare 3 groups.
by
Chris
• 0
Hi Gordon, thank you so much for further guidance! I discussed this issue with psychology doctor who treat Alzheimer patients and they don'…
Comment: Single-Cell Data Simulation from Bulk RNA-seq
by
wichaidi
• 0
Hi - I am wondering what you decided to do. I am currently in a similar condition where I need to create a toy scRNAseq data from bulk.
Votes
Answer: How many of my genes from my gene list are in each KEGG pathway?
Comment: Light difference when using coef vs omit a group when compare 3 groups.
DESeq2 variance transformation error and plot dispersion Estimate
A: DESeq2 variance transformation error and plot dispersion Estimate
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