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limma with interaction term
R biostatistics limma Epigenetics
10 weeks ago • updated 8 weeks ago Jitendra ▴ 10
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limma design model for categorical variable
DNAMethylation limmaGUI biostatistics limma
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Job: Research Associate, statistical genetics & genomics, MRC Biostatistics Unit, University of Cambridge
molecularQTL biostatistics computationalbiology GWAS
22 months ago helene.ruffieux • 0
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Job: Research Associate, computational/statistical genetics & genomics, MRC Biostatistics Unit, University of Cambridge
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2.1 years ago helene.ruffieux • 0
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Job: Job opening - Data Scientist II - Fred Hutchinson Cancer Research Center
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2.1 years ago Fred Hutch (Recruiting) ▴ 40
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Job: Post-Doctoral Research Fellow, Biostatistics - Seattle, WA
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3.9 years ago Fred Hutch (Recruiting) ▴ 40
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Job: Data Sciences Statistician - Dana-Farber Cancer Institute
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4.2 years ago Patrick Kimes ▴ 10
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Job: Metabolomics Bioinformatics Postdoc Position at Steno Diabetes Center Copenhagen
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4.2 years ago Tommi Suvitaival ▴ 10
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Job: Post-Doctoral Research Fellow, Biostatistics, Bioinformatics and Computational Biology - Fred Hutchinson Cancer Research Center - Seattle, WA
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4.5 years ago Fred Hutch (Recruiting) ▴ 40
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Job: Biostatistics Analyst (80-100%) at NEXUS Personalized Health Technologies, ETH Zurich, Switzerland
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4.8 years ago Michael Prummer • 0
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Job: Statistician I - Department of Data Sciences, Dana-Farber Cancer Institute
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5.1 years ago • updated 5.0 years ago Patrick Kimes ▴ 10
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Job: Postdoctoral positions in drug discovery and genome data science
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5.2 years ago Thomas Girke ★ 1.7k
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Job: Biostatistics Analyst II - high throughput single-cell assays
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5.2 years ago careers • 0
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Job: Biostatistics Scientist II - high throughput single-cell assays
Biostatistics Job
5.2 years ago careers • 0
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Job: Data scientist postdoctoral position at Johns Hopkins
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5.3 years ago hjaarop1 • 0
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Job: Postdoctoral Position: Bioinformatics/data science
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5.4 years ago l.tomalin1987 • 0
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Job: PhD and PostDoc position in computational cancer biology in Milan
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5.4 years ago marschaefer • 0
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Job: Statistical Research Associate
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6.0 years ago Fred Hutch (Recruiting) ▴ 40
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Job: Postdoctoral Fellowship in Statistical Genetics and Genomics at the University of Michigan
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6.0 years ago xzhousph • 0
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Job: APPLIED RESEARCH SCIENTIST II, Cancer Epidemiology dept., Moffitt Cancer Center, Tampa, FL
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6.2 years ago claudia.lopez-matamoros • 0
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Job: Bioinformatician/Biostatistician - Institute of Medical Biostatistics, Epidemiology and Informatics (IMBEI), Mainz, Germany
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6.3 years ago Federico Marini ▴ 150
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2.8k
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DESeq2 and betaPrior
deseq2 biostatistics
6.6 years ago Elena Grassi ▴ 10
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Job: Research Fellow or Junior Research Fellow, Statistical Genetics and Genomics, Australia
biostatistics genetics Job
7.0 years ago hong.lee • 0
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1.3k
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News: May Institute Computation and statistics for mass spectrometry and proteomics
proteomics mass spectrometry biostatistics News
7.2 years ago Laurent Gatto 1.6k
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Job: (Bio-)Statistician at dkfz, Heidelberg, Germany
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7.5 years ago m.hummel ▴ 10
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Job: PhD student, Bioinformatician and Bioinformatic Data Manager positions in the areas of Bioinformatics and Biostatistics at the University Medical Cen…
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7.8 years ago Frank Kramer ▴ 60
3
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Job: PhD Positions in Computational Cancer Research
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8.0 years ago Bernd Fischer ▴ 550
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Calculating a score from fold change matrix of pair-wise rna-seq data
rna-seq deseq2 differential gene expression biostatistics
8.1 years ago g.atla ▴ 10
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1.8k
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Job: Data scientist/bioinformatician - Paris
Genomics metabolomics biostatistics data integration Job
8.5 years ago David Enot ▴ 30
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Job: PhD student and post-doctoral position (computational, molecular medicine)
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8.8 years ago Simon Anders ★ 3.7k
30 results • Page 1 of 1
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Comment: Reproducibility issue with scran together with lapply and BiocParallel by ATpoint ★ 4.0k
Thanks Aaron for the response. RNGseed (for me) has no effect. I actually stumbled over this in one of my analysis where I have a constant …
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2) by winwater0928 • 0
Thank you for your comment! 1)"Your contrast is comparing LGR5 to Homeostasis." means (Lgr5)/(Homeostasis). Is it right? Then, I think if…
Answer: Reproducibility issue with scran together with lapply and BiocParallel by Aaron Lun ★ 28k
IIRC **BiocParallel** switches to a different RNG when inside its own functions like `bplapply` - specifically L'Ecuyer-CMRG, as opposed to…
Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k
This looks terrible for RNASeq data, because it's not RNASeq data. It's a matrix of pretty random numbers, which you know because you poste…
Comment: DESeq2 output used for PCA plot on R studio by Aaliya • 0
I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…
Votes
C: null model and DEXSeqDataSet object in DEXSEQ
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
Answer: Interpret plot from DiffBind
Answer: How to retrieve gene ontology GO class from gene list?
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