1
vote
6
replies
552
views
0
votes
5
replies
1.1k
views
updated 6.3 years ago by
Carolin Walter
▴
10
•
written 6.4 years ago by
sinhashruti
•
0
0
votes
2
replies
546
views
5.9 years ago
theodore.georgomanolis
•
0
0
votes
0
replies
162
views
Recent ...
Replies
Answer: how to understand cpm=1 and how filterByExpr works?
by
gowthamee
•
0
I found the following two articles very helpful in explaining the functions "cpm" and "filterByExpr"
Article#1: From reads to genes to pat…
Comment: different results in DESeq2 when comparing groups in two ways
by
zohreh.fazelan
•
0
Thank you for your response.
But I have few comparisons in which there are more significantly expressed genes in the socond way compared to…
Comment: lmFit, continuous exposure, adjustment covariates
by
Gordon Smyth
45k
Your code `t(dat[43:ncol(dat)]` is not even syntactically correct. It could not possibly run in R.
You need to create an expression matrix…
Comment: Handling of missing values in limma
by
Gordon Smyth
45k
limma uses all the observations. There's nothing complicated about it.
limma does not remove any persons from the analysis.
I did not tel…
Answer: after calcNormFactors with EdgeR, how to get TMM normalized matrix?
by
Gordon Smyth
45k
There's no such thing as a "TMM normalized matrix" or "normalized values" in edgeR. Have you read the edgeR User's Guide for how analyses a…
Votes
Awards
• All
Locations
• All
Zheng Zhou, 1 minute ago
United States, 9 minutes ago
Australia, 17 minutes ago
United States, 55 minutes ago
Canada, 1 hour ago
Zheng Zhou, 1 minute ago
United States, 9 minutes ago
Australia, 17 minutes ago
United States, 55 minutes ago
Canada, 1 hour ago
Traffic: 370 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6