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1.3k

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NGS R statistics genomics big data Job

5.2 years ago • updated 4.4 years ago Luo Weijun ★ 1.6k

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848

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computational genomic big data bioinformatics Job

4.8 years ago jmaanaki • 0

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932

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computational biology biostatistics big data data science drug discovery Job

5.2 years ago Thomas Girke ★ 1.7k

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907

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big data methylmix memory problem

updated 5.6 years ago by Martin Morgan 25k • written 5.6 years ago by perdedorium • 0

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1.1k

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Rle Big data coverageByTranscript

6.0 years ago hauken_heyken ▴ 80

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1.3k

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wgcna transcriptome big data metagenomics gene expression

6.2 years ago jol.espinoz ▴ 40

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1.3k

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roadmap project annotationhub epigenomics big data

updated 8.0 years ago by Valerie Obenchain ★ 6.8k • written 8.0 years ago by kevin.rue ▴ 350

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2.1k

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Probabilistic Algorithms Big Data Job

9.0 years ago Doe, Aimee ▴ 40

8 results • Page 1 of 1

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Comment: DESeq filtering specific to contrasts by Michael Love 41k

It will likely not filter it out, but really the per-dataset details would affect the results.

Comment: DESeq filtering specific to contrasts by Carlin95 • 0

Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…

Comment: FilterByExpr low counts with small sample size by Jonathan ▴ 10

Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…

Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa by Seyram M. • 0

Thank you very much for your reply! I will do so. Kind regards, Seyram

Comment: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0` by isaac.vock • 0

Thank you for your response. I can confirm that setting `-t exon` and/or removing `-s 1` and adding `-O` has no impact on the number of suc…

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Install/Switch between multiple versions of R, Rstudio, and Bioconductor

A: Docker container with bioconductor and devtools

Answer: OrgDb for maize

Comment: significant difference of p-values with dream() after updating VariancePartition

How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output

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