Bioconductor BioC2018

Showing : BioC2018 • reset

votes

replies

720

views

bioc2018 News

5.9 years ago Martin Morgan 25k

votes

799

views

BioC2018 News

6.0 years ago Martin Morgan 25k

votes

replies

1.1k

views

conference BioC2018

updated 6.0 years ago by Martin Morgan 25k • written 6.0 years ago by Jenny Drnevich ★ 2.0k

votes

replies

634

views

bioc2018

6.1 years ago dberel ▴ 20

votes

645

views

bioc2018

updated 6.1 years ago by Martin Morgan 25k • written 6.1 years ago by dberel ▴ 20

votes

replies

809

views

bioc2018 News

6.1 years ago Levi Waldron ★ 1.1k

vote

replies

831

views

BioC2018

6.3 years ago destiny_mullens • 0

7 results • Page 1 of 1

Recent ...

Replies

Comment: FilterByExpr low counts with small sample size by Gordon Smyth 50k

As always, it helps to see code. Are you running `voom` or `voomLmFit`? Did you run `normLibSizes()` in edgeR prior to `voom`? Are you star…

Comment: Batch correction and repeated measures by Gordon Smyth 50k

In your code, it was clear that `expr.mat` was a matrix rather than a DGEList, so it has to be a count matrix. If you have a DGEList object…

Comment: Methylation Analysis experiment design using Limma by Gordon Smyth 50k

I don't analyse methylation arrays so cannot advise on specific limma settings for that type of data. Please follow the advice of the methy…

Comment: Light difference when using coef vs omit a group when compare 3 groups. by Chris • 0

Hi Gordon, thank you so much for further guidance! I discussed this issue with psychology doctor who treat Alzheimer patients and they don'…

Comment: Single-Cell Data Simulation from Bulk RNA-seq by wichaidi • 0

Hi - I am wondering what you decided to do. I am currently in a similar condition where I need to create a toy scRNAseq data from bulk.

Votes

Answer: How many of my genes from my gene list are in each KEGG pathway?

Comment: Light difference when using coef vs omit a group when compare 3 groups.

DESeq2 variance transformation error and plot dispersion Estimate

A: DESeq2 variance transformation error and plot dispersion Estimate

ensembl to hgnc symbols creates duplicates

Awards • All