Showing : BioC2021 • reset
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News: Bioconductor 2021 Scholarship and Caregiver Awards
Bioc2021 Conference
2.8 years ago shepherl 3.8k
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News: Nominations for Bioconductor 2021 Awards!
Bioconductor Bioc2021 Recognition Awards
2.9 years ago shepherl 3.8k
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News: Long-term Bioconductor Contribution Award
Bioconductor Bioc2021 Recognition Awards
2.9 years ago shepherl 3.8k
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News: Scientific or Informatic Technology Advancement Award!
Bioconductor Bioc2021 Recognition Awards
2.9 years ago shepherl 3.8k
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News: Bioconductor Award for Outstanding Documentation
Bioc2021 Awards Recognition Bioconductor
2.9 years ago shepherl 3.8k
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News: Community engagement, outreach, and diversity award
awards bioc2021 recognition community Bioconductor
3.0 years ago shepherl 3.8k
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News: Support Site Bioconductor Award
recognition awards bioc2021 Bioconductor
3.0 years ago shepherl 3.8k
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News: Nominations for Bioconductor 2021 Awards!
Awards Recognition Bioconductor Bioc2021
3.0 years ago shepherl 3.8k
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News: Bioc2021 Registration is Open
Conference Bioc2021
3.0 years ago shepherl 3.8k
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News: Submission Deadline for Bioc2021 Next Week!
Conference Bioc2021
updated 3.1 years ago by ★ 1.1k • written 3.1 years ago by 3.8k
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News: BioC2021 organizing committee
BioC2021 S4Vectors
3.4 years ago Levi Waldron ★ 1.1k
11 results • Page 1 of 1
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Answer: FGSEA pre-ranked input in increasing order or decreasing by alserg ▴ 240
The genes are automatically ordered within `fgsea`, there is no need to sort them manually.
Comment: Differential peaks that were not identified in diffbind were identified in diseq by ATpoint ★ 4.0k
Make an MAplot. There is almost certainly an issue with normalization here given the very biased distribution of logFCs as in this Volcano.
Comment: significant difference of p-values with dream() after updating VariancePartition by gabriel.hoffman ▴ 100
See variancePartition updates for [v1.33.11](https://diseaseneurogenomics.github.io/variancePartition/news/index.html#variancepartition-133…
Comment: A ComBat-seq issue: the covariates are confounded by W. Evan Johnson ▴ 850
This is only partially confounded because there is overlap between the batches -- they both have GFP controls that can be used to remove ba…
Answer: Different number of exons in reference genome affects DEXSeq analysis by Alejandro Reyes ★ 1.9k
Likely the new annotation that you are using has more annotated isoforms, and thus the exons are splitted into more disjoint exonic bins. I…
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Comment: DEXSeq DEXSeqDataSet count matrix duplication
Comment: Error in champ.load(): The following specified files do not exist
Answer: Error in read.metharray(basenames = files, extended = extended, verbose = verbos
Using GRanges and IRanges to simply get all chromosome data
A: Using GRanges and IRanges to simply get all chromosome data
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