Bioconductor Bioc

Showing : Bioc • reset

votes

1.9k

views

R bioc

updated 5.1 years ago by Martin Morgan 25k • written 5.1 years ago by pawan12394 • 0

votes

replies

1.7k

views

BioC 2018 Course

6.7 years ago s.munster ▴ 40

votes

1.5k

views

Bioc package installation rforproteomics

updated 8.1 years ago by Laurent Gatto 1.6k • written 8.1 years ago by sarahgrogan • 0

votes

802

views

bioc Bioconductor

updated 2.5 years ago by Hervé Pagès 16k • written 2.5 years ago by cannin ▴ 20

vote

replies

639

views

Asia BioCAsia Conferences Events BioC

written 17 months ago by Peter Hickey ▴ 740

votes

replies

455

views

BioCor bioc BiocVersion

6 months ago • updated 5 months ago feifan • 0

6 results • Page 1 of 1

Recent ...

Replies

Comment: DESeq2 output used for PCA plot on R studio by Aaliya • 0

How am i making the data? I am using the DESeq2 output data which I had generated

Answer: Use of negative binomial model for exponential decay rate estimation using DESeq by Michael Love 41k

Sounds reasonable. For ranking genes, you could choose those with low decay rate but removing thoses where it is indistinguishable from …

Answer: Citation for edgeR user guide by Gordon Smyth 50k

Thanks for thinking about how to cite edgeR. Citations are indeed the main way by which the edgeR authors get credit for their work. The Us…

Comment: DESeq2 output used for PCA plot on R studio by swbarnes2 ★ 1.3k

You are just making up data? What is the point of this exercise?

Comment: How to retrieve gene ontology GO class? by James W. MacDonald 65k

What do you mean by 'the information'? Do you have things in particular that you want?

Votes

Answer: Citation for edgeR user guide

Use of negative binomial model for exponential decay rate estimation using DESeq (or similar)

Answer: How to correct for age, sex, etc. from an RNA-seq data in DESeq2.

Answer: minfi::read.metharray.exp

Comment: Trying to use enrichGO

Awards • All