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Bioc2020
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News:
Community engagement and outreach award
bioconductor
bioc2020
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News
written 3.8 years ago by
shepherl
3.8k
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News:
Bioc2020 - Call for BOF/HAK/FAQ Sections
conference
bioc2020
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4.0 years ago • updated 3.7 years ago
shepherl
3.8k
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News:
Bioc2020 - Call for BOF/HAK/FAQ Sections Still Open
conference
bioc2020
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3.7 years ago
shepherl
3.8k
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News:
Award Nomination Deadline Monday June 15th!
bioc2020
awards
bioconductor
recognition
News
3.8 years ago
shepherl
3.8k
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705
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News:
Scientific or Informatic Technology Advancement Award!
bioconductor
bioc2020
awards
advancement
new technology
News
3.8 years ago
shepherl
3.8k
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753
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News:
Long-term contribution award
bioc2020
bioconductor
lifetime
recognition
awards
News
3.8 years ago
shepherl
3.8k
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714
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News:
Documentation Bioconductor Award
bioconductor
bioc2020
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recognition
documentation
News
3.8 years ago
shepherl
3.8k
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770
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News:
New Package Bioconductor Award
bioconductor
bioc2020
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recognition
News
3.8 years ago
shepherl
3.8k
0
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0
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706
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News:
Support Site Bioconductor Award
bioconductor
bioc2020
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3.8 years ago
shepherl
3.8k
0
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719
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News:
Bioc2020 - Virtual Conference Registration
bioc2020
conference
registration
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3.8 years ago
shepherl
3.8k
4
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1
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3.8k
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News:
Nominations for Bioconductor Awards!
Bioc2020
Bioconductor
Awards
Recognition
News
3.9 years ago • updated 3.8 years ago
shepherl
3.8k
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1
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715
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News:
Bioc2020 - Deadline for workshops/talk/poster proposals TODAY!
conference
bioc2020
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deadline
News
4.0 years ago
shepherl
3.8k
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708
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News:
Bioc2020 - Deadline for workshops/talk/poster TOMORROW
bioc2020
event
conference
bioconductor
News
4.0 years ago
shepherl
3.8k
0
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0
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587
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News:
Bioc2020 - Deadline for workshops/talk/poster proposals in ONE week
bioconductor
conference
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bioc2020
News
4.1 years ago
shepherl
3.8k
0
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647
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News:
Bioc2020 - Deadline for workshops/talk/poster proposals in two weeks!
bioconductor
bioc2020
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4.1 years ago
shepherl
3.8k
0
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0
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680
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News:
Bioc2020 - Registration - Call for abstracts for workshops/talks/poster - travel and caregiver scholarships
conference
bioconductor
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bioc2020
News
4.1 years ago
shepherl
3.8k
2
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1.2k
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News:
Organizing Committee for BioC2020
conference
committee
Bioc2020
News
4.5 years ago
shepherl
3.8k
17 results • Page
1 of 1
Recent ...
Replies
Comment: DEG Filtering
by
Gordon Smyth
50k
RMA normalization is good but batch correction using NOISeq isn't right. Data shouldn't be batch corrected before the limma analysis and NO…
Answer: maftools: Error in validateMaf(maf = maf, isTCGA = isTCGA, rdup = removeDuplicat
by
snijesh
▴ 20
You can try: using `read.delim` or `fread`. ``` my_maf = data.table::fread("path/to/maf/sample.maf") my_maf = read.maf(maf = my_maf) …
Comment: DEG Filtering
by
Amit
• 0
Hi Gordon, Thank you for your response and advice. I want to analyze Dataset GSE18090 (https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi) whic…
Comment: edgeR, 3 x 2 design with a batch effect and contrasts
by
Gordon Smyth
50k
Yes, that is a quote from [A guide to creating design matrices for gene expression experiments](https://bioconductor.org/packages/release/w…
Comment: edgeR, 3 x 2 design with a batch effect and contrasts
by
JKim
• 0
Thank you. I think I found why the order matters. > Although an intercept-free design matrix has been coded using the 0+ notation, the in…
Votes
C: How to check that the reads in two fastq files are in the same order
Answer: edgeR, 3 x 2 design with a batch effect and contrasts
Answer: Need help with creating and plotting temporal clustering analysis of DEGs
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Answer: Problem converting msigdb Human symbols to Zebrafish in gmt format
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