Bioconductor BiocStyle

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biocstyle vignettes build/check error latex

updated 7.3 years ago by Andrzej Oleś ▴ 750 • written 7.4 years ago by Mattia ▴ 10

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1.3k

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Glimma BiocStyle

updated 21 months ago by Mike Smith ★ 6.5k • written 21 months ago by neilzhao ▴ 30

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biocstyle

updated 7.5 years ago by James W. MacDonald 65k • written 7.5 years ago by ioannis.vardaxis ▴ 30

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Bioconductor PackageType BiocStyle

updated 5 months ago by shepherl 3.8k • written 5 months ago by lavanilla44 • 0

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package not available (for R version 3.5.0) BiocStyle

updated 5.9 years ago by Mike Smith ★ 6.5k • written 5.9 years ago by nereidaramirez • 0

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BiocStyle vignettes rmarkdown latex News

6.7 years ago Andrzej Oleś ▴ 750

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biocstyle plotly ggplot2

updated 6.8 years ago by Andrzej Oleś ▴ 750 • written 6.8 years ago by Lluís Revilla Sancho ▴ 730

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biocstyle float

updated 6.5 years ago by Andrzej Oleś ▴ 750 • written 6.5 years ago by Lescai, Francesco ▴ 380

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biocstyle

updated 7.8 years ago by Martin Morgan 25k • written 7.8 years ago by kevin.rue ▴ 350

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BiocStyle

updated 9.0 years ago by Andrzej Oleś ▴ 750 • written 9.0 years ago by Guangchuang Yu ★ 1.2k

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biocstyle vignette

updated 6.8 years ago by Andrzej Oleś ▴ 750 • written 6.8 years ago by Aaron Lun ★ 28k

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BiocStyle

2.5 years ago ullrich ▴ 20

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991

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BiocStyle latex

3.9 years ago Freek Manders • 0

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BiocStyle

updated 3.6 years ago by Mike Smith ★ 6.5k • written 3.6 years ago by federico.nichetti ▴ 10

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1.1k

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biocstyle

updated 7.7 years ago by Andrzej Oleś ▴ 750 • written 7.7 years ago by kevin.rue ▴ 350

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3.2k

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biocstyle Rmarkdown Tutorial

6.7 years ago Wolfgang Huber ★ 13k

16 results • Page 1 of 1

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Comment: How to tell and visualize up/down regulation of pathways from clusterprofiler gs by Guangchuang Yu ★ 1.2k

an example is also presented in <https://pubmed.ncbi.nlm.nih.gov/34557778/>.

Comment: Trying to use enrichGO by Guido Hooiveld ★ 3.9k

Nothing would prevent you from using the `enrichGO` function (or any other function for over-representation analysis [ORA]) with only 14 ge…

Comment: Different Shrunk Log2FC according with reference by andrebolerbarros ▴ 20

Thanks @atpoint for your answer! The issue with that is then it severely hinders the possiblity of using `apeglm` shrinking approach, sinc…

Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge by ATpoint ★ 4.0k

The error that is relevant is `Aborted (core dumped)`. This line 2890 refers to the C source code that throws the error, it is not relevant…

Answer: Different Shrunk Log2FC according with reference by ATpoint ★ 4.0k

Please see: https://support.bioconductor.org/p/p134551/ I asked basically the same before. In short, reference level might have an influ…

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C: SGSeq: moving toward diffex from SGSeq analysis

DEXSeq-Error in FUN(X[[i]], ...) : subscript out of bounds

Subset DEXSeqDataSet In DEXSeq

How to get all possible comparisons in DiffBind

Comment: get BM error

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Scholar to ATpoint ★ 4.0k