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Job:
Scientific Programmer - Cambridge, UK
single cell
job
software engineer
c++
Job
6.5 years ago
Aaron Lun
★ 28k
0
votes
2
replies
1.3k
views
flowCore compilatiopn issue with c++ library conflicting declarations
flowcore
c++
7.2 years ago
junk.yvert
• 0
4
votes
4
replies
1.5k
views
Where can I use the VSN source code in C++?
vsn
r language
C++
source code
updated 7.2 years ago by
Lluís Revilla Sancho
▴ 730 • written 7.2 years ago by
core_wzw
• 0
0
votes
0
replies
1.1k
views
Job:
postdoctoral position in Computational Biology/Statistics/Evolutionary Biology in Madrid, Spain
bioconductor
R
jobs
C++
simulation
Job
7.3 years ago
Ramon Diaz-Uriarte
▴ 70
2
votes
3
replies
1.4k
views
Attaching existing double* pointer to newly created R's SEXP struct in C/C++
R
C++
updated 7.5 years ago by
Aaron Lun
★ 28k • written 7.5 years ago by
Mohammad Alkhamis
• 0
0
votes
0
replies
1.4k
views
Job:
Senior Bioinformatics Researcher - University of Adelaide, South Australia
bioinformatician job
australia
veterinary science
c++
java
Job
8.4 years ago
Steve Pederson
▴ 170
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Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
Alexandre
• 0
Hello James, Thank you very much for your answer and taking the time to read my post. I understand your remark, but isn't the approach o…
Comment: PCA plot suggestions
by
JKim
• 0
cross post: https://www.biostars.org/p/9593486/
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
James W. MacDonald
65k
You cannot correct for technical variability due to batch if samples are nested in batch. The technical and biological differences are comp…
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
James W. MacDonald
65k
You will need to show some reproducible code for anybody to track this down. Please note that `DESeq2` has been used by thousands of people…
Comment: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
by
Alexandre
• 0
My code for the sessionInfo() . If the pictures are too big, I will downsize them. THank you again for reading my post ! ```r > sessionInf…
Votes
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
Answer: Use of negative binomial model for exponential decay rate estimation using DESeq
C: null model and DEXSeqDataSet object in DEXSEQ
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
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