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CATALYST
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218
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Catalyst::cluster function does NOT produce the same results when setting seed
visua
Visualization
CATALYST
4 months ago
elefth.pavlos
▴ 40
0
votes
2
replies
618
views
Invalid spillover matrix with values greater than 1
CATALYST
updated 8 months ago by
SamGG
▴ 350 • written 20 months ago by
David
• 0
2
votes
3
replies
2.1k
views
Keep getting this error "Warning: unable to access index for repository"?
CATALYST
updated 11 months ago by
Hervé Pagès
16k • written 11 months ago by
Hyoann
▴ 20
0
votes
0
replies
396
views
data truncation with sce2fcs()
CATALYST
13 months ago
Shaun
• 0
2
votes
2
replies
1.1k
views
Unable to download CATALYST
CATALYST
21 months ago
David
• 0
1
vote
3
replies
1.0k
views
singlecellexperiments markers after clustering
CATALYST
SingleCellExperiment
updated 3.3 years ago by
helucro
▴ 70 • written 3.3 years ago by
achaillon
• 0
2
votes
2
replies
1.4k
views
Updating package CATALYST
CATALYST
cytofWorkflow
updated 4.4 years ago by
Martin Morgan
25k • written 4.4 years ago by
Brent.OCarrigan
• 0
0
votes
1
reply
967
views
Error after assignPrelim(), CyTOF compenstation
CATALYST
flowCore
assignPrelim
Error in vapply
read.FCS
5.2 years ago
j.krop
• 0
8 results • Page
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Comment: DESeq2 output used for PCA plot on R studio
by
Aaliya
• 0
I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…
Comment: featureCounts reports an error:"featureCounts: input-files.c:2890: SAM_pairer_ge
by
shuwangxinze1996
• 0
Hello, I used 48 cpus and 320G of memory to run this program. My bam files size are 7-9G, wonder how much CPU and memory is enough?
Comment: DESeq2 output used for PCA plot on R studio
by
Kevin Blighe
★ 3.9k
This comment helps.
Comment: DESeq2 output used for PCA plot on R studio
by
Kevin Blighe
★ 3.9k
I am not sure how your comment helps here?
Answer: DESEQ2 IHW and Apelgm method for Shrinkage (adding s values to FDR)
by
Michael Love
41k
> I got many p values that had "1.000000e+00" and padj "1" and stat of "0" when I added the Log threshold of LFC >1 and LFC < -1...is this …
Votes
A: Are published RNA seq data analyses often wrong in calculating p-values and FDR?
A: How to explain how DESeq2 works to someone with zero bioinformatics background?
Answer: Interpret plot from DiffBind
Answer: How to retrieve gene ontology GO class from gene list?
Answer: How to retrieve gene ontology GO class from gene list?
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