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CDS
•
reset
0
votes
4
replies
1.7k
views
Merging each element of a list of Genomic range
txdb
granges
cds
orf
R
updated 5.8 years ago by
James W. MacDonald
65k • written 5.8 years ago by
q.thomas
• 0
1
vote
3
replies
1.4k
views
How can I use Annotatr on CDS?
Annotatr
CDS
Exon
UTR
updated 6.1 years ago by
rcavalca
▴ 140 • written 6.1 years ago by
xie186
• 0
2
votes
1
reply
1.6k
views
Extracting UTRs from exon and CDS data
genomeintervals
UTRs
exons
CDS
GenomicRanges
updated 6.7 years ago by
Michael Lawrence
★ 11k • written 6.7 years ago by
rubi
▴ 110
3
votes
1
reply
1.8k
views
Extracting Coordinates of startcodon from Grangeslist
biomart
bioconductor
grangeslist
cds
ribosome profiling
updated 6.8 years ago by
Hervé Pagès
16k • written 6.8 years ago by
Walter F. Baumann
▴ 10
2
votes
2
replies
2.4k
views
Get the genomic coordinates for the coding sequence (CDS) of a gene
genomicfeatures
txdb.hsapiens.ucsc.hg19.knowngene
cds
7.5 years ago
madsheilskov
▴ 10
0
votes
3
replies
1.8k
views
how to get complete cds annotation information ?
cds
8.3 years ago
KB
▴ 50
2
votes
10
replies
2.1k
views
How to find the amino acid codons corresponding to a subset of a range of genomic positions
genomicfeatures
genomicranges
cds
overlap
updated 8.3 years ago by
Michael Lawrence
★ 11k • written 8.3 years ago by
madsheilskov
▴ 10
0
votes
1
reply
1.3k
views
How to find the amino acid codons corresponding to a subset of a range of genomic positions
genomicfeatures
genomicranges
cds
overlap
updated 2.3 years ago by
balajee
• 0 • written 8.3 years ago by
madsheilskov
▴ 10
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Comment: fgsea fork
by
Sofa
• 0
Workshops and summer schools offer immersive learning experiences outside traditional academic settings, catering to diverse interests and …
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SamGG
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> Alternatively you could run each linear model fit (var1 to var6) in a separate batch run, and again that would presumably work. I think …
Comment: fgsea fork
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3.8k
For What its worth BiocManager should also be able to install the github remotes `BiocManager::install("ctlab/fgsea")`
Comment: fgsea fork
by
alserg
▴ 240
I'm also not sure what you mean by fork, but you also can install the latest version of fgsea directly from GitHub with `devtools::install_…
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by
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▴ 10
thanks Gordon, but our methylation epic array input file is quite big and we can't read it in R by just using laptop memory so we need to …
Votes
transcript name mapping between human and mouse
transcript name mapping between human and mouse
A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
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