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CEL
•
reset
3
votes
1
reply
2.3k
views
Processing RAW CEL files from GEO
CEL
RAW
geoquery
readaffy
updated 9.4 years ago by
Sean Davis
21k • written 9.4 years ago by
PyPer
▴ 20
1
vote
3
replies
1.4k
views
Reading CEL files
cel
affy
updated 7.5 years ago by
James W. MacDonald
65k • written 7.5 years ago by
libya.tahani
• 0
1
vote
2
replies
1.3k
views
Rstudio session aborts when using read.celfiles()
oligo package
Rstudio
fatal error
microarray
CEL
6.4 years ago
biostR
▴ 10
0
votes
2
replies
1.9k
views
CEL to Cibersort mix files, fails find Affymatrix specs
affy
cel
8.3 years ago
thrabe
• 0
0
votes
2
replies
2.5k
views
Problems opening cel files
cel
8.1 years ago
ranjita_duttaroy
• 0
0
votes
3
replies
2.3k
views
view .CEL file- in both windows and ubuntu
cel
.cel fiels
7.1 years ago
farahqureshi5
• 0
0
votes
2
replies
1.9k
views
Reading CEL files using Oligo and pd.hta.2.0 packages in Windows 7
oligo
pd.hta.2.0
CEL
R
windows 7
6.6 years ago
ladhikari
• 0
0
votes
0
replies
1.1k
views
Interpreting Affymetrix Human Genome U133 Plus 2.0 samples
gene expression
gene expression data
cel
affy
affymatrix
6.2 years ago
torgeirous
• 0
0
votes
3
replies
665
views
Input files for Affymetrix platform
Affymetrix
CEL
TXT
updated 4.3 years ago by
James W. MacDonald
65k • written 4.3 years ago by
pbachali
▴ 50
0
votes
2
replies
958
views
How to process triplicate cel data?
microarray
affy
cel
drugmatrix
updated 3.8 years ago by
Gordon Smyth
50k • written 3.8 years ago by
peirinl
• 0
0
votes
1
reply
2.0k
views
how to get tissue name of cel files?
pca
oligo
cel
updated 8.8 years ago by
Gabriel Nathan Kaufman, Mr
▴ 60 • written 8.8 years ago by
angel.ruvalkba
• 0
0
votes
5
replies
1.8k
views
collect an expression dataset
limma
CEL
GEO
affydata
expresiondataset
updated 8.3 years ago by
Robert Castelo
★ 3.1k • written 8.3 years ago by
libya.tahani
• 0
12 results • Page
1 of 1
Recent ...
Replies
Comment: limma models out of memory issue on Slurm HPC
by
Jitendra
▴ 10
thanks Gordon, but our methylation epic array input file is quite big and we can't read it in R by just using laptop memory so we need to …
Comment: Doing comparison of RNA-seq data using EdgeR
by
Michael Love
41k
Just to clarify, when I originally posted the title and tags had listed "DESeq2" and then the post was changed after my answer was added. …
Comment: fgsea fork
by
shepherl
3.8k
Not quite sure what you mean by clone or fork the package on latest version of R. Bioconductor runs all builds on the latest version of R.…
Answer: Doing comparison of RNA-seq data using EdgeR
by
Gordon Smyth
50k
It's pretty easy to do a two-group comparison using edgeR, but you seem to be stuck at the initial stage of reading data into R. If you exp…
Answer: Differing results from plotMDS and PCAtools
by
Gordon Smyth
50k
The reason why the two plots are different is that the first plot is a PCA plot while the second is a biplot. Quite different plots. The P…
Votes
transcript name mapping between human and mouse
transcript name mapping between human and mouse
A: Error object and replacement value dimnames differ, when changing column names o
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
Comment: What benchmark should I use for setting the EdgeR filterByExpr min.count paramet
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Ankit
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michael.s
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James W. MacDonald
65k
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