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raf4
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5.9 years ago
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6.2 years ago
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6.3 years ago
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written 6.4 years ago by
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updated 7.3 years ago by
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written 7.3 years ago by
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WouterDeCoster
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written 7.7 years ago by
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updated 8.3 years ago by
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written 8.3 years ago by
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updated 8.4 years ago by
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updated 8.5 years ago by
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written 8.5 years ago by
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8.7 years ago
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updated 8.8 years ago by
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written 8.8 years ago by
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updated 8.8 years ago by
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written 8.8 years ago by
bioconductor
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8.8 years ago
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updated 8.9 years ago by
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written 8.9 years ago by
NS
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updated 8.9 years ago by
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written 8.9 years ago by
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Replies
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
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Thank you for your comment!
1)"Your contrast is comparing LGR5 to Homeostasis." means (Lgr5)/(Homeostasis). Is it right?
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IIRC **BiocParallel** switches to a different RNG when inside its own functions like `bplapply` - specifically L'Ecuyer-CMRG, as opposed to…
Comment: DESeq2 output used for PCA plot on R studio
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This looks terrible for RNASeq data, because it's not RNASeq data. It's a matrix of pretty random numbers, which you know because you poste…
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I had taken this code from internet, but after reading about it and I did on my own, I would be making a post to ask for the suggestions if…
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Hello, I used 48 cpus and 320G of memory to run this program. My bam files size are 7-9G, wonder how much CPU and memory is enough?
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