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Aberrant number of cells
CellBarcode DropletUtils emptyDrops() Cellranger scRNAseq
updated 8 months ago by ▴ 20 • written 12 months ago by • 0
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Read Cellranger outputs in R, combine as SingleCellExperiment
ReadInR Cellranger GEX+Features+VDJ
11 months ago gregoire.destreel • 0
2 results • Page 1 of 1
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Comment: edgeR supports continuous covariates? by Jeffcgen2000 • 0
Hi Yunshun Chen and Gordon Smyth, does edgeR support mixed model? (https://en.wikipedia.org/wiki/Mixed_model)
Comment: find tandem repeats in DNA by me-nobody • 0
OK. Thank you very much!
Comment: How to normalize long-read RNA-seq data for comparison with short-reads by Bernardo • 0
Discussion for this question continuing on Biostars: https://www.biostars.org/p/9552419/
Comment: What is the difference between these two arguments for log fold change shrinkage by Michael Love 39k
Can you describe how the plots are different?
Answer: find tandem repeats in DNA by ATpoint ★ 2.1k
This is not related to Bioconductor so I suggest posting at biostars.org.
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C: WGCNA: Understanding module-trait correlations
A: WGCNA: Understanding module-trait correlations
A: Differential expression analysis starting from TPM data
Comment: MSc student
on which data type limma::removeBatchEffect can be applyed?
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