Showing : ChAMPdata • reset
2
votes
10
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4.7k
views
Problem at champ.load
ChAMPdata ChAMP
updated 10 months ago by • 0 • written 2.7 years ago by • 0
0
votes
0
replies
611
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Errors trying to load EPIC v2 data in ChAMP
ChAMP ChAMPdata
14 months ago elgomez • 0
2
votes
7
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4.4k
views
Annotation for EPICv2
EpicV2 ChAMPdata
updated 14 months ago by • 0 • written 15 months ago by • 0
2
votes
4
replies
1.7k
views
Error EPICv2 ChAMP
ChAMPdata IlluminaHumanMethylationEPICv2anno.20a1.hg38 ChAMP
updated 21 months ago by 68k • written 21 months ago by • 0
0
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0
replies
750
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how to solve this error?
ChAMPdata ChAMP
23 months ago Meghana • 0
0
votes
2
replies
2.0k
views
Trouble Loading Data into Champ
loaddata ChAMPdata champload R ChAMP
updated 2.6 years ago by • 0 • written 4.9 years ago by • 0
0
votes
1
reply
1.4k
views
Error in ChAMP GUI
ChAMP shiny ChAMPdata
updated 3.8 years ago by • 0 • written 3.8 years ago by • 0
0
votes
3
replies
1.6k
views
Wrong terminology used on champ.load() output of ChAMP package?
ChAMPdata ChAMP
updated 4.1 years ago by ▴ 780 • written 4.1 years ago by • 0
0
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3
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2.0k
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Why the order of sample names in the beta matrix affect the analysis results of Champ.DMP? What should I do?
ChAMP limma Bioconductor ChAMPdata
updated 11 months ago by • 0 • written 4.4 years ago by • 0
2
votes
1
reply
1.9k
views
How to download the ChAMP dependency ChAMPdata
ChAMP ChAMPdata
updated 4.7 years ago by 4.3k • written 4.7 years ago by ▴ 10
0
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2
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1.4k
views
Error myDMP not found
Illumina methylationArrayAnalysis ChAMPdata ChAMP
5.0 years ago sissialva21 • 0
11 results • Page 1 of 1
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Comment: Development of MSstat workflow to analyze DIA time series data by Gordon Smyth 53k
Are there any other explanatory factors or covariates in your experiment other than time point? Do you have biological replicates at each t…
Answer: Question about the filterByExpr function inputs in edgeR by Gordon Smyth 53k
Either of these choices is perfectly acceptable from an edgeR analysis point of view, it is more to do with which is more relevant for your…
Comment: Clarification on counting in Rsubread (featureCounts) by Gordon Smyth 53k
Your follow-up question is very much wider than the first, and is essentially a research question rather a software question. As one of the…
Comment: Error in creating BSGenome package by Nguyen • 0
I keep running into this error, please help: ``` Writing all sequences to './BSgenome.Panubis.NCBI.Panubis1.0/inst/extdata/single_sequenc…
Comment: Joining different datasets and analyzing using the group-specific condition effe by James W. MacDonald 68k
There is an example of how you can do this in the [DESeq vignette][1]. An alternative would be to fit a linear mixed model using the `vari…
Votes
A: DESeq2: What is the unit of DESeq2 normalized read count (VST)? Is it tag per mi
Answer: Clarification on counting in Rsubread (featureCounts)
Comment: Clarification on counting in Rsubread (featureCounts)
C: ControlGenes/ housekeeping genes Deseq2
Answer: Clarification on counting in Rsubread (featureCounts)
Awards • All
Popular Question to mohammedtoufiq91 ▴ 10
Popular Question to Lluís Revilla Sancho ▴ 760
Commentator to James W. MacDonald 68k
Great Question to fl ▴ 20
Popular Question to Gordon Smyth 53k
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