Bioconductor ChAMPdata

Showing : ChAMPdata • reset

votes

replies

348

views

EpicV2 ChAMPdata

6 days ago • updated 5 days ago nurkenber • 0

votes

replies

701

views

ChAMPdata IlluminaHumanMethylationEPICv2anno.20a1.hg38 ChAMP

updated 5 months ago by James W. MacDonald 67k • written 5 months ago by Mirella Aurora • 0

votes

replies

393

views

ChAMPdata ChAMP

7 months ago Meghana • 0

votes

replies

1.5k

views

loaddata ChAMPdata champload R ChAMP

updated 16 months ago by hfbarrerat • 0 • written 3.6 years ago by Bethan • 0

votes

replies

2.6k

views

ChAMPdata ChAMP

updated 8 weeks ago by mshah • 0 • written 18 months ago by angel • 0

votes

1.0k

views

ChAMP shiny ChAMPdata

updated 2.6 years ago by anna.stanislawska • 0 • written 2.6 years ago by Mari • 0

votes

replies

1.3k

views

ChAMPdata ChAMP

updated 2.8 years ago by Basti ▴ 780 • written 2.8 years ago by mariat • 0

votes

replies

1.4k

views

ChAMP limma Bioconductor ChAMPdata

3.1 years ago Jinyue • 0

votes

1.5k

views

ChAMP ChAMPdata

updated 3.4 years ago by shepherl 4.0k • written 3.4 years ago by Federica ▴ 10

votes

replies

1.0k

views

Illumina methylationArrayAnalysis ChAMPdata ChAMP

3.7 years ago sissialva21 • 0

10 results • Page 1 of 1

Recent ...

Replies

Comment: How to reverse complement some elements of a DNAStringSet by Christine Jones • 0

Fantastic, thank you

Comment: When running contrasts, does it use normalized read counts? by Katherine • 0

Ok, so the comment I was given where they said DeSeq2 should be with normalized counts is incorrect. the ```normalized_counts``` variable …

Answer: How to reverse complement some elements of a DNAStringSet by James W. MacDonald 67k

You should always try the vectorized method first, rather than looping. ``` > myFasta[myFasta_rc] <- reverseComplement(myFasta[myFasta_…

Answer: When running contrasts, does it use normalized read counts? by James W. MacDonald 67k

A contrast is a comparison of two or more coefficients. When you run `nbiomWaldTest` you are fitting the GLM and estimating coefficients. T…

Comment: Too much data for Diffbind by Ou, Jianhong ★ 1.3k

Just in case if somebody still want to apply summits greater than 0 and got the same error, you can filter out the peaks with start positio…

Votes

Comment: featureCounts fails to load annotation file

Answer: How to reverse complement some elements of a DNAStringSet

Answer: KEGGgraph result difference

Answer: What should be the normalization protocol for RNA seq data for WGCNA?

What should be the normalization protocol for RNA seq data for WGCNA?

Awards • All

Scholar to James W. MacDonald 67k