Bioconductor ChAMPdata

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ChAMPdata IlluminaHumanMethylationEPICv2anno.20a1.hg38 ChAMP

updated 15 hours ago by James W. MacDonald 65k • written 4 days ago by Mirella Aurora • 0

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loaddata ChAMPdata champload R ChAMP

updated 10 months ago by hfbarrerat • 0 • written 3.2 years ago by Bethan • 0

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864

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Illumina methylationArrayAnalysis ChAMPdata ChAMP

3.2 years ago sissialva21 • 0

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1.9k

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ChAMPdata ChAMP

updated 5 weeks ago by James W. MacDonald 65k • written 12 months ago by angel • 0

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ChAMP limma Bioconductor ChAMPdata

2.7 years ago • updated 2.6 years ago Jinyue • 0

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1.2k

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ChAMP ChAMPdata

updated 3.0 years ago by shepherl 3.8k • written 3.0 years ago by Federica ▴ 10

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ChAMPdata ChAMP

9 weeks ago Meghana • 0

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777

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ChAMP shiny ChAMPdata

updated 2.1 years ago by anna.stanislawska • 0 • written 2.1 years ago by Mari • 0

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ChAMPdata ChAMP

updated 2.3 years ago by Basti ▴ 770 • written 2.3 years ago by mariat • 0

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Answer: minfi::read.metharray.exp by Basti ▴ 770

Could you show `list.files("~/Users/clarachretienneau/Desktop/clock epigenetic/PJ1209132_ScanData")` ? There may be a problem related to th…

Comment: DESeq2 - dispersion estimation when there is none by WardDeb • 0

Thank you for the pointers, I'll revert back again to the method section of the paper. As for the negative relationship of the estimated di…

Comment: Error for AnnotationForge makeOrgPackageFromNCBI function by Gayatri • 0

Hello James, How to generate the db? By running the makeOrgPackageFromNCBI() command? I have tried doing that, first by just deleting the …

Answer: DMR.Plot shows error "Error in simpleLoess(y, x, w, span, degree = degree, param by Tim Peters ▴ 170

Hi Jose and Russ, Apologies to Jose for not seeing this earlier. Sometimes the loess smoother in the bottom panel will throw this error …

Comment: Trying to use enrichGO by fernanda.backsouza • 0

Sure, I changed it but still NULL G0 <- enrichGO( gene = ortologos_filtrados$Gene.ID, OrgDb = org.Cs.eg.db, keyType = "ENTREZID",…

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Answer: DESeq2 - dispersion estimation when there is none

Comment: Cannabis and KEGGgraph

Answer: Cannabis and KEGGgraph

Answer: Differentially expressed genes in monocle pseudotime

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